Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0872 ATGGATCTCAGCCAGCCTGCAGGTGAAAACTACGGCAATCCCATTACTTGCTTCTTTCACGTTTTCTTCAAGGGCGCAGCTTTGGCATTTTACATTGTATTTTCCATCTTTGTTGGTAACTTTGTCGTCATTTTCGTGGTCACTGCCCTTCTTGCTGCTCTTGATTTTTGGGTCGTCAAGAATGTAAGTGGCAGAATCTTAGTTGGTTTGAGGTGGTGGAATGAAATTGATGATCAGGGTGAGAGTGTTTGGAGATTTGAATGCCTCGATCAAGAGTCAATGGCTCGGTTGAACAAGAAAGATTCATGGCTTTTCTGGTGGACCCTTTACTTGAACATGCTAAGAATCAAGTTCAACAATTTGCTGCTAGGACACTTGCCTCAAGGGTCTCATCTACCTTTCAGTCAGCATTTAGTATTGTCTGAATTGTTTACTGCCGAACATGTAAATGCAAGAAGCAGTGGATTATCTTTGAAATTTGAAAGCAGAGATTAG 495 0.4162 MDLSQPAGENYGNPITCFFHVFFKGAALAFYIVFSIFVGNFVVIFVVTALLAALDFWVVKNVSGRILVGLRWWNEIDDQGESVWRFECLDQESMARLNKKDSWLFWWTLYLNMLRIKFNNLLLGHLPQGSHLPFSQHLVLSELFTAEHVNARSSGLSLKFESRD* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0872 164 PANTHER UNCHARACTERIZED 1 114 IPR008564 GO:0016021
Ahy16g0872 164 PANTHER GOLGI APPARATUS MEMBRANE PROTEIN TVP23 1 114 - -
Ahy16g0872 164 Pfam Eukaryotic protein of unknown function (DUF846) 13 114 IPR008564 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0872 Ahy-Chr16 15664305 15666237 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g0872 - - rcu:8267294 199.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0872 16 15664305 15666237 Ahy16g0872 16 15664305 15666237 ECH
Ahy16g0872 16 15664305 15666237 Ahy6g0487 6 5929955 5931877 hybridization
Ahy16g0872 16 15664305 15666237 Ahy19g1361 19 29551195 29554210 PCT
Ahy16g0872 16 15664305 15666237 Ahy9g1083 9 23160955 23163919 PCT
Ahy19g1361 19 29551195 29554210 Ahy16g0872 16 15664305 15666237 PCT
Ahy9g1083 9 23160955 23163919 Ahy16g0872 16 15664305 15666237 PCT