Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy19g1063 ATGAATTTGCAACAAGTGGGGCAATCTAAATCATCTAATGGATATGGTCGTCGGAAGTATGAAAAAGGAGCAACTAAGTCTGACAGTAAAATCTCATCTGGAAAATCAAATACCAGCGGTGTAGCTGAAGTGACTGGCAGTAAAAGTGGTACTTATGAGAGTCCGTCACGTGATCGGCTAGTGTATGTAACATCATCTCTTCTTGGGCACCATGTAGAAGTCCAGGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCAACAAATACTGAGAAAGATTTTGGAATAATTTTAAAAGTGGCTCGCCTGATAAAGGATAGCTCTTTGCAAGGGCAAAGATCCAGTGTAGAAATTGTCAGCAAGGCTACTACTAAGACTTTAATTATACCTTCCAAAGAGCTTGTACAAGTCATAGCGAAGGATGTTGCTGTTACTAGGGATGGCCAGCCTAGTGAATCTCATTATGCTATGCATCAGGATATAATGGTTGATTCAGTTATATCTCAATCTCGCCATGTCGAGATGGGGAGAGAATTACAACGATGGGTACCTGATGATGATGATCCACAATGCCCTGAACTGGAAAATATCTTTGATGGCCCTTGGAATAGGGGATGGGATCAGTTTGAAACAAATAAAACGTTGTTTGGTGTAAATAGCACATTCAATGAAGACCTCTACACAACAAAACTTGAAAAAGGGCCTCAGATGAAAGAGCTGGAACAAAAAGCTTCAAGAATAGCAAAAGAAATTGAAGGGGAGGATACCCATGATCTTCATCTGGCAGAGGAAAGAGGCCGTTATCATGATGATTTTGATAGTGATGAAGAAACCAGATTCTCTTCAGTATATAGGGGTAAAGGTGTTGATGATAGTGGATATGATGAAGATGAGGAATCAAGGTTGGATTCATACAATTCTGAAACATTTGGCAGCATCACAGGTTCGGTCATTAAGAAGCCGGGTGAAACAAGTGGTGGAAAAGCCAACAATGGAGCACAAACTTGGTCAAACTTCTCTAAAATGGATCACTCACAGTCATCTCTGTCAAATATTGGTGTGGATTTAGGCCGCTCTGGTGCTGATGATCATGCTAAGCAATTAGCATCTGAACACCCTACTCAAAATTACTCATTTCAAGATGGGGAATGCAGGATTCAGAACTGTGTTAGTGATCCAAATGAAACCAGTGGTAATGCCACAGAAGAAAATCAGGTACAAGCTGAGGATGTCCGCCTGTCAAAATCTGAGGGTTTGTATTTACAGCCACCACATAACTTGAAGAATGTCGTCTCTGTCTCTGATAAGGGGGAATCATCACCTAACACCACCTCCTTTACCCCTTCACCACATATTATATCAAAGGGTCTTGAAAAAACTGGGTTATGTGGGGAGTTTACTACTGGGACTTCAGCATCTGGCAGATCTAGTGAGCAAACAAAAGCTGCAAATTCACGTGGAAGAGTAGGTAGTGCCTCATCATCTGGTTCAGATAATGTGGGCGGTGTGGCCGCATCTTCTGGTTCTGGTCTATCTCCGAGTTCTTCAGTTGGATCATTGTCTTCTGAAAGATCTATTTTGAATCCCCATGCCAAGGAATTCAAGCTTAATCCTAATGCCAAGAGTTTTATTCCGTCCCAAAATCCTGTTAGGTCCCGATCCCCAGTCTCTGATGGTTCCTTCTATTTCCCAGCTAATGTATCTACGGTACCAAATATGCCCGCGATGCCCATGGGTATTGGAGTTGGTAATACTTTTGCTGGGCCACCACAGCCTATGATATATAATCCGCAGGTAGCACAAATGCCATCCCAAGCATATTTTCATCCAAATGGACCACAGTATGGACAGCTTCTTGGTCATCCTAGGCAGGTTTTGTACATGCCAAGCTACCTACCTGAAACGCCGTATAAGGGACGAGATTATTGA 1932 0.4213 MNLQQVGQSKSSNGYGRRKYEKGATKSDSKISSGKSNTSGVAEVTGSKSGTYESPSRDRLVYVTSSLLGHHVEVQVKNGSIYSGIFHATNTEKDFGIILKVARLIKDSSLQGQRSSVEIVSKATTKTLIIPSKELVQVIAKDVAVTRDGQPSESHYAMHQDIMVDSVISQSRHVEMGRELQRWVPDDDDPQCPELENIFDGPWNRGWDQFETNKTLFGVNSTFNEDLYTTKLEKGPQMKELEQKASRIAKEIEGEDTHDLHLAEERGRYHDDFDSDEETRFSSVYRGKGVDDSGYDEDEESRLDSYNSETFGSITGSVIKKPGETSGGKANNGAQTWSNFSKMDHSQSSLSNIGVDLGRSGADDHAKQLASEHPTQNYSFQDGECRIQNCVSDPNETSGNATEENQVQAEDVRLSKSEGLYLQPPHNLKNVVSVSDKGESSPNTTSFTPSPHIISKGLEKTGLCGEFTTGTSASGRSSEQTKAANSRGRVGSASSSGSDNVGGVAASSGSGLSPSSSVGSLSSERSILNPHAKEFKLNPNAKSFIPSQNPVRSRSPVSDGSFYFPANVSTVPNMPAMPMGIGVGNTFAGPPQPMIYNPQVAQMPSQAYFHPNGPQYGQLLGHPRQVLYMPSYLPETPYKGRDY* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy19g1063 643 PANTHER ATAXIN-2 HOMOLOG 4 634 - -
Ahy19g1063 643 Pfam Ataxin 2 SM domain 57 141 IPR025852 -
Ahy19g1063 643 MobiDBLite consensus disorder prediction 255 309 - -
Ahy19g1063 643 MobiDBLite consensus disorder prediction 422 524 - -
Ahy19g1063 643 PANTHER ATAXIN 2-RELATED 4 634 IPR045117 GO:0003723
Ahy19g1063 643 MobiDBLite consensus disorder prediction 465 524 - -
Ahy19g1063 643 MobiDBLite consensus disorder prediction 29 55 - -
Ahy19g1063 643 MobiDBLite consensus disorder prediction 428 452 - -
Ahy19g1063 643 SMART LsmAD_2 217 287 IPR009604 -
Ahy19g1063 643 MobiDBLite consensus disorder prediction 255 305 - -
Ahy19g1063 643 MobiDBLite consensus disorder prediction 1 55 - -
Ahy19g1063 643 Pfam LsmAD domain 217 286 IPR009604 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy19g1063 Ahy-Chr19 17553258 17561930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy19g1063 - - gmx:100778053 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g1063 19 17553258 17561930 Ahy19g1063 19 17553258 17561930 ECH
Ahy19g1063 19 17553258 17561930 Ahy9g0817 9 13451523 13460136 hybridization
Ahy18g0280 18 2319952 2326599 Ahy19g1063 19 17553258 17561930 PCT
Ahy8g1069 8 25709330 25715992 Ahy19g1063 19 17553258 17561930 PCT
Ahy19g1063 19 17553258 17561930 Ahy18g0280 18 2319952 2326599 PCT
Ahy19g1063 19 17553258 17561930 Ahy8g1069 8 25709330 25715992 PCT