Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2965 ATGGCTGCTACAATGGAAGATAGTCCAAGAAGTCCAGAGGCAAAGCTTGGAATGAGAGTAGAAGATCTTTGGGATGTTCAAGAACCACAACTAAGTCCTAATGAGAAGCTCAATGCTTGTTTTGAAAGCATACCTGTCTCTGCTTTCCCTCCACCTCCTTCAAACCAAGAAATTGAGATAAAATCAGATGCTACCTTAGCTGAAGCAGTTGAAATACTAGCAGAACACAACATCCTGAGTGCACCTGTGGTGGATGTTGATGCACCTGAAGATGCCAGCTGGATTGACAGATACATAGGGATAGTTGAATTTGCAGGAATTGTTGTGTGGATTCTTCATCAGTCTGATCCTACATCTCCTAAGAGTCCATCAAGTAGATCCAATGGAACTGCAATTGAAGCTGCAACTAATGGCATGGCTTCTCTACAACTTGAGGGCAAGGACCTTGGATCTTCTACAACAACTTCAGGGAACTTCTTTGAGGATCTCACTTCTTCTGAACTTTATAAGAATACCAAGGTTAGAGATATCTCAGGATCATTTCGGTGGGCCCCATTTCTAGCACTGGAGAGGTCAAACTCATTCTTGACCATGCTATTGCTACTCTCAAAGTACAAGATGAAGAGTATTCCTGTGGTGGACTTAGGTGCTGGAAGAATTGATCAAATCATTACTCAATCTGCTGTGATACACATGTTGGTTGAATGTGCTGGTCTTCAATGGTTTGAGAGCTGGGGAACCAAGAAAATATCTGAAGTTGGTCTTCCCCTAGTCACACCAAATCATATCATCAAGGTATATGAGGATGAACCAGTGCTTCAAGCCTTTAGATTGATGAGAAAAAAGAGGATTGGAGGTGTGCCTGTAGTGGAAAGGGGTGGCAACAATCCAGTTGGTAATATAAGCCTCCATGATGTTCAGTTCTTGCTAACTGCCCCAGAAATATACCATGATTATAGAGCAATTACTGCCAAGGATTTCCTAACAGCTGTTAAAAGCTACTTGAAGAAGCATGAAAAGGTTGTTTCTATGTCAAGGGGTTTGATTACTTGCAAAAAGGATTGTACAATAAAAGAGTTGATCCAATTGCTAGATCATGAAAAGATTCACAGGGTCTATGTTGTGGATGATGATGGAAATCTTGAAGGACTCGTCACTCTAAGAGACATAATCTCAAGGCTTGTACATGAGCCACGTGGCTACTTTGGTGATTTCTTTGATGGCGTTCTTCCCATGCCTCCAAATAGTAGGGTTTAA 1257 0.4161 MAATMEDSPRSPEAKLGMRVEDLWDVQEPQLSPNEKLNACFESIPVSAFPPPPSNQEIEIKSDATLAEAVEILAEHNILSAPVVDVDAPEDASWIDRYIGIVEFAGIVVWILHQSDPTSPKSPSSRSNGTAIEAATNGMASLQLEGKDLGSSTTTSGNFFEDLTSSELYKNTKVRDISGSFRWAPFLALERSNSFLTMLLLLSKYKMKSIPVVDLGAGRIDQIITQSAVIHMLVECAGLQWFESWGTKKISEVGLPLVTPNHIIKVYEDEPVLQAFRLMRKKRIGGVPVVERGGNNPVGNISLHDVQFLLTAPEIYHDYRAITAKDFLTAVKSYLKKHEKVVSMSRGLITCKKDCTIKELIQLLDHEKIHRVYVVDDDGNLEGLVTLRDIISRLVHEPRGYFGDFFDGVLPMPPNSRV* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2965 418 PANTHER BNAA06G16460D PROTEIN 8 418 - -
Ahy18g2965 418 SUPERFAMILY CBS-domain pair 223 404 IPR046342 -
Ahy18g2965 418 Gene3D - 36 239 IPR046342 -
Ahy18g2965 418 SUPERFAMILY CBS-domain pair 30 235 IPR046342 -
Ahy18g2965 418 CDD CBS_pair_SF 60 119 - -
Ahy18g2965 418 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 8 418 - -
Ahy18g2965 418 CDD CBS_pair_SF 199 306 - -
Ahy18g2965 418 ProSiteProfiles CBS domain profile. 53 118 IPR000644 -
Ahy18g2965 418 ProSiteProfiles CBS domain profile. 344 402 IPR000644 -
Ahy18g2965 418 CDD CBS_pair_SF 262 391 - -
Ahy18g2965 418 ProSiteProfiles CBS domain profile. 258 319 IPR000644 -
Ahy18g2965 418 SMART cbs_1 347 395 IPR000644 -
Ahy18g2965 418 SMART cbs_1 185 234 IPR000644 -
Ahy18g2965 418 SMART cbs_1 56 112 IPR000644 -
Ahy18g2965 418 SMART cbs_1 262 311 IPR000644 -
Ahy18g2965 418 Gene3D - 247 397 IPR046342 -
Ahy18g2965 418 Pfam CBS domain 344 395 IPR000644 -
Ahy18g2965 418 Pfam CBS domain 58 103 IPR000644 -
Ahy18g2965 418 Pfam CBS domain 263 306 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2965 Ahy-Chr18 134729052 134732585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2965 - - gmx:100776754 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2965 18 134729052 134732585 Ahy8g2715 8 50638094 50641009 hybridization
Ahy11g1580 11 75873813 75877082 Ahy18g2965 18 134729052 134732585 PCT
Ahy18g2965 18 134729052 134732585 Ahy11g1580 11 75873813 75877082 PCT