Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy11g1580 ATGGCAATGAATACAATGGTGGCAGAGGGTCCAAGAAGCCCAGAAGCGAAGCTTGGGTTGAGAGTGGAGGATCTTTGGGATGTTATGGAGCCACAGCTAAGTCCTACTGAGAAGCTTAATGCCTGCTTTGAAAGCATCCCAGTCTCTGCGTTTCCAATGGCTCCTTCAAACAAAGAACTTGAGATAAAATCAGATGCCACACTAGCCGAAGCTGTAAAAGTACTGGCACGTCACAACATTCTGAGTGCACCTGTGGTGAATGTTCACGCACCTGAAGATGCAAGTTGGCTTGATAGATACATCGGAATAATTGAGTTTGCTGGAATTGCTGTATGGATTCTGCATCAGTCTGAACCTACAACTCCTACAAGTCCATCCACTCCAAACACTCCAACCAGTGCAAGTGCTATTGCAGCTAAAGCAAACGGATTAACCTTTGCTCTAGAACTTGAAAATTTAGGCCTTGGATCTGCTGCAACCACTTCAGGGAACTTCTTTGAGGATCTCATTTCTTCTGAACCTTACAAGAACACCAAGGTCTGCGATATTTCAGGGACGTTCCGGTGGGCTCCATTTCTTGCTTTGGAGAGATCAAACTCGTTTCTAACCATGCTGTTGCTGCTTTCTAAGTACAAGATGAAGAGTGTCCCTGTGGTGGATTTAGGTGCTGATAGAATTGACAACATTATTACACAATCTGCAGTGATTCATATGCTAGCGGAATGTGCCGGGCTTCAGTGGTTTGAAAGCTGGGGAACCAAGAGTCTATCTGAAGTCGGTCTTCCCTTGGTGACACCAGACCAAATCATCAAGGTTTATGAGGATGAACCAGTGCTTCAAGCATTTAAATTGATGAGGAAGAAGAGGATTGGAGGGGTGCCTGTGATGGATAGGGATCAAGGCAAGGCAGTTGGTAACATAAGCTTGCGAGATGTTCAGTTCTTGCTAACTGCCCCAGAAATCTACCATGATTATAGATCTATTACAGTAAAGGACTTTGTGACAGCAGTTAGAAGCTACCTAGAGAAGAATAAAGATGCAAACCCAATGTCAAGTGAATTAGTTACATGTAAAATTCATTGCACGATCAAGGATCTGATTAAATTGCTTGATGATGAGAAGATTCATCGAGTCTATGTCGTCGATGATGATGGGAATCTACAAGGACTTATCACGCTGAGGGATATCATCTCAAGGCTAGTACACGAGCCACGTGGCTATTTTGGTGATTTCTTTGATGGTGTTCTTCCCCTGCCTCTGGATTGCCGGGTTTGA 1275 0.4416 MAMNTMVAEGPRSPEAKLGLRVEDLWDVMEPQLSPTEKLNACFESIPVSAFPMAPSNKELEIKSDATLAEAVKVLARHNILSAPVVNVHAPEDASWLDRYIGIIEFAGIAVWILHQSEPTTPTSPSTPNTPTSASAIAAKANGLTFALELENLGLGSAATTSGNFFEDLISSEPYKNTKVCDISGTFRWAPFLALERSNSFLTMLLLLSKYKMKSVPVVDLGADRIDNIITQSAVIHMLAECAGLQWFESWGTKSLSEVGLPLVTPDQIIKVYEDEPVLQAFKLMRKKRIGGVPVMDRDQGKAVGNISLRDVQFLLTAPEIYHDYRSITVKDFVTAVRSYLEKNKDANPMSSELVTCKIHCTIKDLIKLLDDEKIHRVYVVDDDGNLQGLITLRDIISRLVHEPRGYFGDFFDGVLPLPLDCRV* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy11g1580 424 ProSiteProfiles CBS domain profile. 350 408 IPR000644 -
Ahy11g1580 424 Gene3D - 253 403 IPR046342 -
Ahy11g1580 424 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 8 424 - -
Ahy11g1580 424 SUPERFAMILY CBS-domain pair 228 410 IPR046342 -
Ahy11g1580 424 ProSiteProfiles CBS domain profile. 53 120 IPR000644 -
Ahy11g1580 424 Pfam CBS domain 350 401 IPR000644 -
Ahy11g1580 424 Pfam CBS domain 268 312 IPR000644 -
Ahy11g1580 424 ProSiteProfiles CBS domain profile. 264 325 IPR000644 -
Ahy11g1580 424 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1-RELATED 8 424 - -
Ahy11g1580 424 SUPERFAMILY CBS-domain pair 31 240 IPR046342 -
Ahy11g1580 424 CDD CBS_pair_SF 267 397 - -
Ahy11g1580 424 Gene3D - 42 244 IPR046342 -
Ahy11g1580 424 SMART cbs_1 58 114 IPR000644 -
Ahy11g1580 424 SMART cbs_1 353 401 IPR000644 -
Ahy11g1580 424 SMART cbs_1 268 317 IPR000644 -
Ahy11g1580 424 SMART cbs_1 191 240 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy11g1580 Ahy-Chr11 75873813 75877082 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy11g1580 - - gmx:100812388 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1580 11 75873813 75877082 Ahy11g1580 11 75873813 75877082 ECH
Ahy11g1580 11 75873813 75877082 Ahy18g2965 18 134729052 134732585 PCT
Ahy11g1580 11 75873813 75877082 Ahy8g2715 8 50638094 50641009 PCT
Ahy18g2965 18 134729052 134732585 Ahy11g1580 11 75873813 75877082 PCT
Ahy8g2715 8 50638094 50641009 Ahy11g1580 11 75873813 75877082 PCT