Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2844 ATGGCAGAGGAAGCTCCAAAGACATCACCATCACCACCACAAGAGGAAGCAGTGTTGCATGTGGAACAAGTTATGGTCACTGACGTTGACGAGAAAGAACACTCCACCAACGCCATTGTTGAGAATGAGAAGGAGACAGAGAAAGAGCATGTTGTTGAAGATGAAAAGAAAGAAGAAGAAGCTTCTGTAGCTGCAAATGAAAATAATGCTGGCGAGGATTCAAAAGCATGTGATGATGAGAAGGTTCCAGAATCAGGTTCGTTCAAGGAAGAGAGCACGAAGGTTTCTGAACTTGCTGAGACTGAGAAGAAGGCACTTCAAGAGCTCAAAACCCTAATCCAAACTGCACTCAACAATCGTGAATTCTCTGCACCAAAAGAAGAAAAGCCTGCAGTTGAATCTGATGTAGCAGAAGAAAAGAAGAAGGAAGAAGAAGAAGAAGAAGAAGAAGCAGAGGAAAACCACCTAATTGAGGAGAACAAGGATTCATCAGAAGAAAAAGAAGCTGCAGCAGAAGTGAAAGAAGCAACAACAACAGCAGAAGCTTTATCTTCTTCTGTGGATGATGACGAAGCAAAAACCGTTGAGGCCATTGAAGAAACCGTGGTGGCAGTTTCTTCCACAACTGAAGCTGAAGAACTAGCTCCAAAGAAGGAAGAAGAGTGTTCGCCATTGTTGGCGCCAGAAGAAGTCTCAATCTGGGGAGTGCCGCTCCTCGCCGACGAAAGAACAGACGTGATCCTCTTGAAGTTCCTCCGCGCACGTGATTTCAGGGTAAAAGAAGCGTTCACCATGATCAGGAACACGATCAAGTGGCGAAAGGAGTTCAAGATCGACGAATTACTGGAACAAGAAGAAGAAGATAATATTTTCATTAATACAATGGATTTTGAAAAGGCGGTATACATGCACGGATACGACAAAGAAGGGCACCCCGTGTGTTACAACATCTATGGCGAGTTCCAGAACAAGGAGCTGTATAAGAAGGCATTCTCTGATGAGGAGAAGAGGGAGAGGTTCTTGAAATGGAGGATTAGGTTCCTTGAGAGGAGTATTAGGAAGCTTGATTTCTGGCCTGGTGGGATATCCACCATTGTTCAGGTTAATGATCTCAAGAATTCACCTGGTCCTGCTAAGTGGGAACTTAGACAAGCAACCAAACAGGCCCTTCAATTGCTTCAAGATAATTACCCTGAATTTGTTGCCAAACAGGTGTTTATCAATGTGCCATGGTGGTACTTGGCAGTGAACAGGATGATAAGTCCATTTCTGACACAGAGAACAAAGAGCAAGTTTGTGTTTGCTGGTCCTTCCAAAACAGCCGAGACCCTTCTAAGGTACATTGCAGCTGAGCAACTTTCTGTGAAGTATGGAGGACTAAGTAAAGATGGGGAATTCGGAAATAACGATGCTGTTACCGAGATAACTGTGAGACCAGCTGCTAAACATTCTGTGGAGTTTCCAGTTACTGAGAATTGTGTATTGTCTTGGGAGATGAGAGTAATAGGGTGGGATATAAGTTATGGTGCTGAATTTGTGCCAAACTCAGAAGGAAGCTACACAGTAATAATTCAAAAAGCTAGAAAGGTTGCACCATCAGAAGAACCTGTTCTTTGCAACAGTTTCAAGATTGGTGAACCTGGCAAAGTGGTTCTCACCATTGAAAACCAAAGCTCCAAGAAGAAGAAGCTCTTGTACCGCTTGAAGACCAAACCTGAATGA 1722 0.4361 MAEEAPKTSPSPPQEEAVLHVEQVMVTDVDEKEHSTNAIVENEKETEKEHVVEDEKKEEEASVAANENNAGEDSKACDDEKVPESGSFKEESTKVSELAETEKKALQELKTLIQTALNNREFSAPKEEKPAVESDVAEEKKKEEEEEEEEAEENHLIEENKDSSEEKEAAAEVKEATTTAEALSSSVDDDEAKTVEAIEETVVAVSSTTEAEELAPKKEEECSPLLAPEEVSIWGVPLLADERTDVILLKFLRARDFRVKEAFTMIRNTIKWRKEFKIDELLEQEEEDNIFINTMDFEKAVYMHGYDKEGHPVCYNIYGEFQNKELYKKAFSDEEKRERFLKWRIRFLERSIRKLDFWPGGISTIVQVNDLKNSPGPAKWELRQATKQALQLLQDNYPEFVAKQVFINVPWWYLAVNRMISPFLTQRTKSKFVFAGPSKTAETLLRYIAAEQLSVKYGGLSKDGEFGNNDAVTEITVRPAAKHSVEFPVTENCVLSWEMRVIGWDISYGAEFVPNSEGSYTVIIQKARKVAPSEEPVLCNSFKIGEPGKVVLTIENQSSKKKKLLYRLKTKPE* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2844 573 Coils Coil 129 166 - -
Ahy18g2844 573 SUPERFAMILY CRAL/TRIO domain 300 462 IPR036865 -
Ahy18g2844 573 MobiDBLite consensus disorder prediction 30 99 - -
Ahy18g2844 573 MobiDBLite consensus disorder prediction 122 139 - -
Ahy18g2844 573 Gene3D - 288 474 IPR036865 -
Ahy18g2844 573 SMART sec14_4 294 462 IPR001251 -
Ahy18g2844 573 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 470 568 IPR036598 -
Ahy18g2844 573 SMART CRAL_TRIO_N_2 244 269 IPR011074 -
Ahy18g2844 573 Coils Coil 99 119 - -
Ahy18g2844 573 PANTHER PATELLIN-1 1 572 IPR044834 GO:0008289
Ahy18g2844 573 Gene3D GOLD domain 475 570 - -
Ahy18g2844 573 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 303 465 IPR001251 -
Ahy18g2844 573 SUPERFAMILY CRAL/TRIO N-terminal domain 95 284 IPR036273 -
Ahy18g2844 573 MobiDBLite consensus disorder prediction 140 155 - -
Ahy18g2844 573 MobiDBLite consensus disorder prediction 30 63 - -
Ahy18g2844 573 MobiDBLite consensus disorder prediction 72 99 - -
Ahy18g2844 573 Gene3D - 210 275 - -
Ahy18g2844 573 ProSiteProfiles GOLD domain profile. 469 570 IPR009038 -
Ahy18g2844 573 Pfam CRAL/TRIO domain 299 459 IPR001251 -
Ahy18g2844 573 CDD SEC14 296 460 IPR001251 -
Ahy18g2844 573 MobiDBLite consensus disorder prediction 116 193 - -
Ahy18g2844 573 MobiDBLite consensus disorder prediction 156 174 - -
Ahy18g2844 573 Pfam CRAL/TRIO, N-terminal domain 221 268 IPR011074 -
Ahy18g2844 573 PANTHER PATELLIN-3 PROTEIN 1 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2844 Ahy-Chr18 132909926 132913461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g2844 248 439 Acyl Lipid Metabolism Gene Families AT5G47730 28.571 1.66e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2844 - - gmx:100805585 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2844 18 132909926 132913461 Ahy18g2844 18 132909926 132913461 ECH
Ahy13g2986 13 120357417 120360641 Ahy18g2844 18 132909926 132913461 PCT
Ahy3g2648 3 117696071 117699848 Ahy18g2844 18 132909926 132913461 PCT
Ahy18g2844 18 132909926 132913461 Ahy13g2986 13 120357417 120360641 PCT
Ahy18g2844 18 132909926 132913461 Ahy3g2648 3 117696071 117699848 PCT