Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2842 ATGGCATTGACTGCAGCCGAGCTAGTCCACGCTGCAACAAGCGACAAGCTGACTGAAACTGATTGGACAAAAAATATTGAAATATGCGAATTAGTTGCTCAGGATCCAAGGCATGCTAGAGATGTTGTCAAATCTATCAAAAAGCGTTTGGGTAGCAAACACCACAATACTCAACTTTTTGCTGTCATGCTGCTGGAGATGTTGATGAACAATGTTGGAGAGCATATCCATGAGCAGGTTATTGATACGGGAATACTCCCTATTCTTGTGAAAATTGTGAAGAAAAAGTCAGATTTTCCTGTGAGGGAGCGGATATTTCTCCTACTTGATGCTACACAGACATCCCTTGGTGGTGCTTCCGGAAAGTTTCCGCAGTATTACAATGCATATTATGAGTTGGTGAGTGCCGGAGTGCAATTTCCTCAAAGGGCTGAAGTGGTCCAATCAAATCATGCTAATTCACAACCAAATGGGACTAATAATGTACCGAACAGGGAGCAGGCCCCAACTAGACCTGAAAGTGTTCCTCCGAAGGATGCCGAGACTGTCCCTGAGTCTAGCATCATTCAAAAGGCAAGTAATGCATTACAAGTTCTGAAAGAAGTCCTTGATGCAGTTGATGCTCAAAACCCTCAGGCAGCAAGGGATGAATTCACTCTTGACCTTGTCGAACAATGTTCTTTTCAGAAGCAAAGGGTAATGCATCTTGTCATGGCTTCTCGAGACGAGAGGATAGTTTCTCGGGCAATCGAATTGAATGAGCAGCTTCATAAAGTTCTAGCAAGACATGATGACCTCCTAGCTGGCAGAGTTACAACAACTGCTCCTCCTCGATTTGATCACGAAGACGAAGAAGCAGAGGAGGAAGAGGAGCCAGAACAGTTAGTCCGAAGATTACGCAAAGGAAAGGCTTGCGCGAGGCCTGAAGACGAAAAACAAAAAACCGAGATCCCAAGCTTGGGTTTGCTTGGGGAGAGACTCCACCGTCCGCTAATACGGCCACTCTCTTTGGAGCCATCTCGGGAGGCTAATACTCGTTCGCCACCTGCTTCAATGCTGCCGCCTCCACGTGCAAAACCGAATGGGGAGGTTCCTCATGTGACAATTCCGCCACCGCCGGCAAAGCACATTGAGAGGGAAAGATTCTTTCAGGAAAACAAGGATGGTTCTAATTTGTCTGGCCATATGAGAGGCCTCTCTTTACATAGTAGAAATGGTAGCAGCTCTCTCAGTGGAAGCTATGATCTTAGTGATTAA 1257 0.4598 MALTAAELVHAATSDKLTETDWTKNIEICELVAQDPRHARDVVKSIKKRLGSKHHNTQLFAVMLLEMLMNNVGEHIHEQVIDTGILPILVKIVKKKSDFPVRERIFLLLDATQTSLGGASGKFPQYYNAYYELVSAGVQFPQRAEVVQSNHANSQPNGTNNVPNREQAPTRPESVPPKDAETVPESSIIQKASNALQVLKEVLDAVDAQNPQAARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSRAIELNEQLHKVLARHDDLLAGRVTTTAPPRFDHEDEEAEEEEEPEQLVRRLRKGKACARPEDEKQKTEIPSLGLLGERLHRPLIRPLSLEPSREANTRSPPASMLPPPRAKPNGEVPHVTIPPPPAKHIERERFFQENKDGSNLSGHMRGLSLHSRNGSSSLSGSYDLSD* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2842 418 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 6 418 - -
Ahy18g2842 418 MobiDBLite consensus disorder prediction 146 168 - -
Ahy18g2842 418 MobiDBLite consensus disorder prediction 333 418 - -
Ahy18g2842 418 Pfam VHS domain 7 114 IPR002014 GO:0035091|GO:0043130
Ahy18g2842 418 MobiDBLite consensus disorder prediction 271 295 - -
Ahy18g2842 418 Pfam GAT domain 194 269 IPR004152 GO:0035091|GO:0043130
Ahy18g2842 418 MobiDBLite consensus disorder prediction 303 322 - -
Ahy18g2842 418 Gene3D - 184 275 IPR038425 -
Ahy18g2842 418 PANTHER TOM1-LIKE PROTEIN 6 418 IPR044836 GO:0035091|GO:0043130|GO:0043328
Ahy18g2842 418 SUPERFAMILY ENTH/VHS domain 7 142 IPR008942 -
Ahy18g2842 418 MobiDBLite consensus disorder prediction 349 372 - -
Ahy18g2842 418 SUPERFAMILY GAT-like domain 185 270 - -
Ahy18g2842 418 MobiDBLite consensus disorder prediction 146 184 - -
Ahy18g2842 418 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Ahy18g2842 418 MobiDBLite consensus disorder prediction 387 418 - -
Ahy18g2842 418 CDD VHS 5 133 - -
Ahy18g2842 418 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Ahy18g2842 418 Coils Coil 189 209 - -
Ahy18g2842 418 Gene3D - 3 139 IPR008942 -
Ahy18g2842 418 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2842 Ahy-Chr18 132868145 132872875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2842 - - gmx:100785131 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2842 18 132868145 132872875 Ahy18g2842 18 132868145 132872875 ECH
Ahy18g2842 18 132868145 132872875 Ahy8g2558 8 48501048 48505838 hybridization
Ahy13g2992 13 120576481 120581004 Ahy18g2842 18 132868145 132872875 PCT
Ahy3g2653 3 117851546 117856266 Ahy18g2842 18 132868145 132872875 PCT
Ahy18g2842 18 132868145 132872875 Ahy13g2992 13 120576481 120581004 PCT
Ahy18g2842 18 132868145 132872875 Ahy3g2653 3 117851546 117856266 PCT