Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g2992 ATGGCAGCTGAGCGAGTTAATGCTGCAACAAGTCAGAAACTGACTGAAACTGACTGGATGAAAAATATTGAAATCTGTGAATTAGTTGCTCATGATCAAAGGCAAGCTAGAGATGTTGTTAAGGCCATAAAAAAGAGACTAGGCAACAAGAACCCCAATACACAACTTTATGCAGTTATGTTGTTGGAAATGTTGATGAACAACATTGGAGATCCAATTCATAAACAGGTTGTTGAAACAGGAACCATTCCTATTCTTGTGAAAATTGTGAAGAAAAAGTCAGATTTGCCTGTAAGGGAACGGATATTTCTCCTGCTAGATGCTACACAAACAGCCCTTGGTGGTGCTTCTGGAAAGTTTCCACAATATTATAATGCATATTATGAGTTGGTGAGTGCTGGGGTGCAGTTTCCTCAAAGGTCTCAGGAATTCCAATCAAATTGTCCAAGTTCACAACCTAACAGGACTAATAATGGACCAAACAGGGAACAGGCCTTGCCTAGATCTGGTGGGGTTGCTCAGCAAGCGGAGTCCGATCCTGTTCCCGAATCTAGCATTATTCAGAAGGCTAGCAATGCATTAGAAGTTCTAAAAGAAGTCCTTGATGCTGTTGATGCGCAACATCCTCAGGGAGCAAGGGATGAATTCACCCTTGATCTTGTCGAGCAATGTTCGTTTCAAAAACAGAGAGTAATGCATCTTGTGATGGCTTCTCGTGATGAGAGGATTGTTTCACAAGCAATAGAATTAAACGAGCAGCTTCAGGAAGTACTTGCAAGGCATGATGACCTCGTTTCTGGCAGAGCCACAACTCCCAATCACTTTGTCCATGAAGAAGTAGAAGAGGAGGAGGAACCTGAGCAGTTATTCCGAAGATTACGCAAAGGAAAGGCTTGTGCAAGGCCTGAAGATGAAGAGACTGAACCTCGTTTCCCTAACTGGGGTTTGCTTGAAGAGAGACTCAACCGTGCACTAATAAGACCGCTCTCTTTGGAGCCATCTCGACAAACCAACGCCCGTGCTGCACCTGTTGTGGTTCCACCTCCAAATGCAAGGAACAATGGGGAGCTTCCTCATGTAGCAATTCCACCACCACCTGCGAAGCACTTTGAAAGGGAGAGATATTTTCAGGAGAACAAGAAGAATGGTGCTACTTTGGCCAGTCACTTGAGGGGCCTCTCCTTGCATAGTTACAATGGCAGCAGCTCTCACAGTGGAAGCTTCGATTCTAGTGATTAA 1239 0.4431 MAAERVNAATSQKLTETDWMKNIEICELVAHDQRQARDVVKAIKKRLGNKNPNTQLYAVMLLEMLMNNIGDPIHKQVVETGTIPILVKIVKKKSDLPVRERIFLLLDATQTALGGASGKFPQYYNAYYELVSAGVQFPQRSQEFQSNCPSSQPNRTNNGPNREQALPRSGGVAQQAESDPVPESSIIQKASNALEVLKEVLDAVDAQHPQGARDEFTLDLVEQCSFQKQRVMHLVMASRDERIVSQAIELNEQLQEVLARHDDLVSGRATTPNHFVHEEVEEEEEPEQLFRRLRKGKACARPEDEETEPRFPNWGLLEERLNRALIRPLSLEPSRQTNARAAPVVVPPPNARNNGELPHVAIPPPPAKHFERERYFQENKKNGATLASHLRGLSLHSYNGSSSHSGSFDSSD* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g2992 412 Pfam VHS domain 5 112 IPR002014 GO:0035091|GO:0043130
Ahy13g2992 412 PANTHER ENTH/VHS/GAT FAMILY PROTEIN 1 412 - -
Ahy13g2992 412 Gene3D - 2 136 IPR008942 -
Ahy13g2992 412 PANTHER TOM1-LIKE PROTEIN 1 412 IPR044836 GO:0035091|GO:0043130|GO:0043328
Ahy13g2992 412 Coils Coil 187 207 - -
Ahy13g2992 412 Pfam GAT domain 192 267 IPR004152 GO:0035091|GO:0043130
Ahy13g2992 412 SUPERFAMILY GAT-like domain 142 268 - -
Ahy13g2992 412 CDD VHS 2 130 - -
Ahy13g2992 412 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Ahy13g2992 412 MobiDBLite consensus disorder prediction 141 164 - -
Ahy13g2992 412 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Ahy13g2992 412 MobiDBLite consensus disorder prediction 141 184 - -
Ahy13g2992 412 CDD GAT_GGA_like_plant 186 264 - -
Ahy13g2992 412 SUPERFAMILY ENTH/VHS domain 4 139 IPR008942 -
Ahy13g2992 412 Gene3D - 183 273 IPR038425 -
Ahy13g2992 412 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g2992 Ahy-Chr13 120576481 120581004 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g2992 - - gmx:100802949 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g2992 13 120576481 120581004 Ahy13g2992 13 120576481 120581004 ECH
Ahy13g2992 13 120576481 120581004 Ahy3g2653 3 117851546 117856266 hybridization
Ahy13g2992 13 120576481 120581004 Ahy18g2842 18 132868145 132872875 PCT
Ahy13g2992 13 120576481 120581004 Ahy8g2558 8 48501048 48505838 PCT
Ahy18g2842 18 132868145 132872875 Ahy13g2992 13 120576481 120581004 PCT
Ahy8g2558 8 48501048 48505838 Ahy13g2992 13 120576481 120581004 PCT