Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2597 ATGTTCAAGCAATTCCTCAGCAAGCTCCCTCGCAACAAGAAGCTCGATGCTGATGAGTCAAGCCAAGTTAATTCATCCTCTGAGCCAAGCTCCTCCATGGACATCCCCGAATCCCCACGTGCCGCTGGTAAAAACCACCATACAGACCGTGGCAGCTCTTCCAACGCAAAGCGGGCGTCTTCTATTTTTCCAGAAAGCGCCATTTCAGGGATTGAAGCCTTGATCCCTTTCAAGGATGTTCCACCCTTGGAGAAGATGAACCTCTTTGTTAGCAAGCTCAACCTTTGTTGTGTCACCTTCGATTTCACCAACCCAAGTAAAAACACTGTCGAAAAGGACATAAAAAGAAGAACTTTGATTGAACTCGTTGATTTTGTAGCTTCTGGCTCTATTAAATTCACTGAGCCGGCTATTCTAGCAATGTGTAGAATGTGTGCCATCAACTTATTCCGTGTTTTCCCACCAAATTACCGGTCTCGGCAGTTGTCCGGTGGATCCGGTGGCAGAGATGGCGAGAATGATGATGATGAGCCATCTTTTGATCCTTCTTGGCCACACTTGCAAATTGTGTATGACTTGTTGCTTAAGTTTGTTAGCTCCCCTTGTCTTGATGCAAAGGTGGCAAAGAAATACATTGATTGTTCATTTATTTCGAGATTGCTAGAGTTGTTTGATTCAGAGGATCCTAGGGAGAGGGATTGCTTAAAAACCATAATGCATAGGGTTTATGGTAAATTCATGGTGCACAGGCCTTACATAAGAAAGTCCATTAACAATGTGTTCTTTAGGTTTGTGTTTGAAACTGAGAGGCACAATGGGATTGCTGAGTTGTTAGAGATCTTTGGAAGCATAATTAGTGGTTTTGCTTTGCCTTTGAAGGAGGAGCACAAGATCTTCTTATGGAGGGTGTTGATCCCCTTGCACAAGCCCAAATCCCTGGGGGTATACTACCAGCAATTGTCCTATTGCATCACTCAATTTATAGAGAAAGAGCCAAAGTTGGCGAGTACCGTCATTAGAGGATTGTTGAAATATTGGCCTATAACCAATAGTCAGAAGGAGGTGATGTTCCTTGGTGAATTGGAAGAAATTCTGGAAGTGATTAACATGGTAGAGTTCCAGAAGGTCATGCTGCCGTTGTTTTGGCGAATTGGATGCTGCATTAAAAGTTCTCATTTTCAGGTAGCTGAAAGAGCCCTTTTCTTGTGGAACAACGACCACATCGTCAACCTGATCGCTCACAACCGTCAGGTAATCTTGCCGATCATATTACCGGCATTAGATAGGAATTGTCAAGCCCATTGGAACCAGGCAGTTCTCAACTTAACTCTCAATGTTAGGAAGATATTTGTAGAGATGGATGAGAAGCTGTACGTTTCGTGCCTTGCTCGGTTCAAAGAGGAAGAAGCAAGGCAAAGCTCGGAAGCCGAGAAGCGGAAGGAAGCATGGAAACAACTCGAGAAAGCGGCTGGTGTCCGACCAGAGATTGGAAACACAACTGTTTTAGTTTAG 1512 0.4411 MFKQFLSKLPRNKKLDADESSQVNSSSEPSSSMDIPESPRAAGKNHHTDRGSSSNAKRASSIFPESAISGIEALIPFKDVPPLEKMNLFVSKLNLCCVTFDFTNPSKNTVEKDIKRRTLIELVDFVASGSIKFTEPAILAMCRMCAINLFRVFPPNYRSRQLSGGSGGRDGENDDDEPSFDPSWPHLQIVYDLLLKFVSSPCLDAKVAKKYIDCSFISRLLELFDSEDPRERDCLKTIMHRVYGKFMVHRPYIRKSINNVFFRFVFETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSLGVYYQQLSYCITQFIEKEPKLASTVIRGLLKYWPITNSQKEVMFLGELEEILEVINMVEFQKVMLPLFWRIGCCIKSSHFQVAERALFLWNNDHIVNLIAHNRQVILPIILPALDRNCQAHWNQAVLNLTLNVRKIFVEMDEKLYVSCLARFKEEEARQSSEAEKRKEAWKQLEKAAGVRPEIGNTTVLV* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2597 503 PIRSF PP2A_B56 4 502 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy18g2597 503 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 503 - -
Ahy18g2597 503 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 503 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy18g2597 503 Coils Coil 466 486 - -
Ahy18g2597 503 MobiDBLite consensus disorder prediction 19 34 - -
Ahy18g2597 503 MobiDBLite consensus disorder prediction 1 59 - -
Ahy18g2597 503 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy18g2597 503 SUPERFAMILY ARM repeat 87 485 IPR016024 -
Ahy18g2597 503 Gene3D - 81 489 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2597 Ahy-Chr18 128187946 128191457 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2597 K11584 - gmx:100781390 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g2597 18 128187946 128191457 Ahy18g2597 18 128187946 128191457 ECH
Ahy18g2597 18 128187946 128191457 Ahy8g2364 8 46086917 46090430 hybridization
Ahy16g3066 16 146171651 146174398 Ahy18g2597 18 128187946 128191457 PCT
Ahy18g2597 18 128187946 128191457 Ahy16g3066 16 146171651 146174398 PCT