Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3066 ATGCTCAAGCAATTTCTTAGCAAGAAGTCTCAAAAACCGCTAAAATATGATTCGGAGAAGTCGAGTCGAGGCGACTCTTCACCTTCCACCATTGATTCGTCATGCGCCCTTAGAACGGGCTGTTGGTCGCACATTGATGAAGATTCCTTAGCACAAGCTAGCACCACAAAAGAATCTTCAGTTCCATTATTTCTTTTGATGAATATGACAGTTGGGATTACTCAACCTTCCATGCCATTCAAGGATGTTCCCAATAATGATGAAAAGTTGAATCTATTCATGAGTAAGTTGAGCCTTTGTTGTGTCACATTTGATTTTACAAACCCTAATTGCAACAAAGACATAATGATGCAAAGAGATCTAAAGAGGAGAATTTTGATTGAACTTGTTGATTTTGTGGGCTCGTATGATGGTAATAACAAGTTTAATGAAACTACCATTCTCGCCATGCGTGGAATGTTTACCATAAACCTATTTAGGGTTTTTCCACCGAATTATAGTGACGATGGCGAACCTAGATTCGACTCGGCCTGGCCTCATCTCCAATTTGTTTACGAATTATTGCTTAAATTCATTACTTCACCGGGCCTAGATGTAAAACTTGCAAAGAAATACATCGATTATTCATTTATATTGAAGTTGCTCGATTTATTCGAATCTGGAGATCCAAGAGAAAGAGATTGCTTGAAGACAATTCTACATAGGCTCTATGGGAAATTCACAATGCATAGATCATATATTCGAAAATCAGTTAACAACATATTCTACAGTTTTGTGTATGAGAATGAGAAACACCGTGGGATTGGTGAGTTGTTAGAGTTTTATGGAAGTGTGATTAGTGGGTTCACTTTGCCATTGAAGGAGGAACACAAGATATTTTTGTGGAGAGTTTTGATCCCATTGCATAAGCCAAAATCTTTGGGAGTGTATTTTCAGCAATTATCATATTGTATAATGCTATTTATAGAGAAAGAGCAAAAGTTATCAAGCATTGTGATAAGGGGTTTGTTAAAATATTGGCCAATAACAAATAGCCAAAAGGAGGTGTTGTTCTTGGGTGAAATTGAAGAAATTTTGGAATCAATTCATATGGTAGAGTTCCAAAGGGTCATGGTCCCATTGTTTTGGCGAATTGGGTGTTGCATTAATAGCTCACACTCTCAGGTAGCTGAAAAGAGTCTTTTGTTATGGAACAATGAGCGCATTGCGAATTTAATTGCTCAAAACTGCCAAACAATCCTACCTATCATATTTCCAGCTTTAGAGAGAAATATTAAAAGCCACTGGAACTCAGAAGTTGTGACTTTAACTCATAACATTAGAAAGACTTTCTTGGACATGGATAAGAAGTTGTTCCTTTCTTGTCATTCTCGACTCAAGGAGCAAAAGGTCATTTTGAACTTAGAAGCTGAGAAGCGAAAGGAAGCTTGGAAACGACTAGACCATGTAGCTAGTCTCAAGCATCCTCTCATTGGAAATAATAATCATAATAATTCTACTATTTCTTCATTTTCTCCTTCTAAGACCTCATGA 1533 0.3705 MLKQFLSKKSQKPLKYDSEKSSRGDSSPSTIDSSCALRTGCWSHIDEDSLAQASTTKESSVPLFLLMNMTVGITQPSMPFKDVPNNDEKLNLFMSKLSLCCVTFDFTNPNCNKDIMMQRDLKRRILIELVDFVGSYDGNNKFNETTILAMRGMFTINLFRVFPPNYSDDGEPRFDSAWPHLQFVYELLLKFITSPGLDVKLAKKYIDYSFILKLLDLFESGDPRERDCLKTILHRLYGKFTMHRSYIRKSVNNIFYSFVYENEKHRGIGELLEFYGSVISGFTLPLKEEHKIFLWRVLIPLHKPKSLGVYFQQLSYCIMLFIEKEQKLSSIVIRGLLKYWPITNSQKEVLFLGEIEEILESIHMVEFQRVMVPLFWRIGCCINSSHSQVAEKSLLLWNNERIANLIAQNCQTILPIIFPALERNIKSHWNSEVVTLTHNIRKTFLDMDKKLFLSCHSRLKEQKVILNLEAEKRKEAWKRLDHVASLKHPLIGNNNHNNSTISSFSPSKTS* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3066 510 SUPERFAMILY ARM repeat 91 479 IPR016024 -
Ahy16g3066 510 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 79 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy16g3066 510 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 494 - -
Ahy16g3066 510 PIRSF PP2A_B56 4 509 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy16g3066 510 Gene3D - 85 483 IPR011989 -
Ahy16g3066 510 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Ahy16g3066 510 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3066 Ahy-Chr16 146171651 146174398 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3066 K11584 - gmx:100775273 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3066 16 146171651 146174398 Ahy16g3066 16 146171651 146174398 ECH
Ahy16g3066 16 146171651 146174398 Ahy18g2597 18 128187946 128191457 PCT
Ahy16g3066 16 146171651 146174398 Ahy8g2364 8 46086917 46090430 PCT
Ahy18g2597 18 128187946 128191457 Ahy16g3066 16 146171651 146174398 PCT
Ahy8g2364 8 46086917 46090430 Ahy16g3066 16 146171651 146174398 PCT