Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g2556 ATGGCTGATGATAAAGCAGTTGGGGAAGATGAAAAGAAAGAGCCAAGTACTACTGCCACCAAAAATGTGAGACAGAAGCGCAGAGGGTTCCTTTCCGGAATTTGGAATGGACTATTTAGGTTACATGGGGATGATTTTGAGAAGAGGCTCCAATACATATCTAAAGAAGAGGCTGCAGTTCTTTCTAGAATGAAAAGGAGGTCACGATCCTGGAGGCAGATATCTTGGAATGTAATTGTATTTTCTGTTATATTAGAGGTCATTGCTGTAGTTTATGCTATCATGACAACAAGATCTGTGGATATGAATTGGAAGATGAGGGCAGTCCGGGTTTCGCCAATGTTTCTTTTGCCTGTATTAGCATCTGCAGCATATTCAACCTTTGTTAGCTTTGTGAGGATTTGTGATCGCAGGGACGAGAAAATTCTTGTAAGGCTTAGAGAAGAAAGGCAAGCAAAAATTGATGAGCTGAAGGAAAAGACAAATTATTACACTACACAACAGCTCATTCAGAGATATGACCCAGATCCAGCCGCAAAAGCAGCTGCGGCAACTGTTTTGGCATCTAAGTTGGGTGCAGAATCAGGTTTGAGGGTGTATATGGGAGATGAATTAAATCCCACTGCTACAATGGGGAGGAGCAATGATGTTGAACTTGTACAGTCAAATGGACTTCGAAATCGAAAACAACCTCACGCTAGATCCTCTAGTTCAGGGGCAACTACTCCATTTAATCCTGATCAACAACATTTAGTTGGAGGATCCGGGGGACTTGATCAAACTCAGACTTCTGAGTATAATCAGCTTGTTGTTGAGCATCACCAACCACAAAGTTCAACCTCACAAGATGGAGGATGGCTTGCTAAAATTGCAGCGTTGCTTGTGGGCGAGGATCCTACCCAGTCTTATGCTCTCATATGTGGCAACTGCCATATGCATAATGGTCTAGCTCGGAAGGAGGATTTCCCATATGTAACATACTATTGCCCCCACTGTCATGCCCTCAATCAACCAAAGCAATTAGATGGCAATATCTCCCGGGCATCCCCAAGAATGGGGTCTCCGAAAGCTTATGAAAGTGAGGCAGTAAAATATGCTAGCGGTTCTGCAGCTGAGAGCATGCTACTCACAAGCAATAACCCCGTAGATGTTAGTGCTTCTGCAACTGAGAGCACAATCACAAGCAATAGCCCCGTTAATGCTAGCCCTGAGATTGAGGAAGTATCAGAAAGGACGAGTTCGGAAGATAAAGCTGATTAA 1260 0.4357 MADDKAVGEDEKKEPSTTATKNVRQKRRGFLSGIWNGLFRLHGDDFEKRLQYISKEEAAVLSRMKRRSRSWRQISWNVIVFSVILEVIAVVYAIMTTRSVDMNWKMRAVRVSPMFLLPVLASAAYSTFVSFVRICDRRDEKILVRLREERQAKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGAESGLRVYMGDELNPTATMGRSNDVELVQSNGLRNRKQPHARSSSSGATTPFNPDQQHLVGGSGGLDQTQTSEYNQLVVEHHQPQSSTSQDGGWLAKIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPYVTYYCPHCHALNQPKQLDGNISRASPRMGSPKAYESEAVKYASGSAAESMLLTSNNPVDVSASATESTITSNSPVNASPEIEEVSERTSSEDKAD* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g2556 419 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 286 336 IPR019273 -
Ahy18g2556 419 MobiDBLite consensus disorder prediction 382 419 - -
Ahy18g2556 419 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 13 416 IPR040115 GO:0071786
Ahy18g2556 419 MobiDBLite consensus disorder prediction 1 21 - -
Ahy18g2556 419 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 13 416 - -
Ahy18g2556 419 MobiDBLite consensus disorder prediction 1 23 - -
Ahy18g2556 419 MobiDBLite consensus disorder prediction 382 407 - -
Ahy18g2556 419 MobiDBLite consensus disorder prediction 225 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g2556 Ahy-Chr18 127362143 127366610 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g2556 K23292 - gmx:100797087 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2912 16 143435934 143440547 Ahy18g2556 18 127362143 127366610 PCT
Ahy18g2556 18 127362143 127366610 Ahy16g2912 16 143435934 143440547 PCT