Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2912 ATGGGTGAGGAGAATAAGGTAGTTGGAGAAGGTGAGAAGAAGAAAGAGGAAAGTGTTGATGCCACTGCTGTTGTTGGTGATGGAGAGGAGGAAAAGAATAATAAGAAGAAGAAGAGTAAGAAGCAGGGGTTAATTTCTCGAATTTGGAACGGGATTTTCAGAAGACGTAGCGATGATTTCGAGAAGAGGCTGCAGTATATTTCCAAAGAGGAAGCTGCGGTTATGGCCAGGGTCAATCGGAGAAACCGGTCGTGGCGGAGAACTTCGCGCCAGATCATCATAATTTCTGTTATATTTGAGGCCGTTGCTGTAGGTTTTGCAATCATGACAACTAGATCAATGGATATGAATTGGAAGATGAGAGCAATCCGAGTTTTGCCAATGTTTCTTTTGCCTGCCTTGTCATCTGCTGTTTATTCAACGTATGTTAGCTTCACAAGGATGCGTGATCGCAAGGACCAGAAAATTCTTGTAAAGCTTCGGGCTGAAAGGCAGGCAAAAATTGATGAGCTCAAAGAAAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGACACAGATCCAGCAGCAAAGGCAGCTGCTGCAACTGTTTTGGCATCCAAGTTGGGTGCAGATTCTGGCTTGAAAGTGTACGTGGGAGATGAATCTAACTCTGCTGCTCCAACAGGGCAGAGCATTGATGCTGATCCTGCAAGGTCTAGTGGACTTAGAAATCGGAAAACAGTGCATTCTAGATCCATTAGTTCTGGGACATCTACTCCAAATGTTCCTGATCAACAACTAGTTGGTGCTGCCGGAACTGATCAAACCCTTACTTCTGAGCACAATCAGCTTGTAGTTGTTGAACATCACCAACCTCAAAGTTCAACATCACAAGATGGGTGGATTGCTAGAATCGCAGCATTGCTTGTAGGTGAGGATCCAACACAGTCATATGCACTCATATGCGGTAACTGCCATATGCATAATGGTCTTGCTCGGAAGGAGGATTTCCCATTTATTACTTACTATTGCCCACACTGTCGCGCCTTAAACAAACCAAAGCAATCAGATGAGCGTGTCTCCAGTGGTAACTCCCCAAATATGAGGTTTCCAAAAACAGATGATGGTGAAGCAGTAGTTAAAACTGTTAGTGCTTCTGCTGCTGACAGCATAATCAAAAGCAATAATCCCTTAGATACTGCTACCCCTGAGATTGAAGAAGTATCCGAAGTGGCTAGTTCAGGGGAGAAAAATAGTTAA 1251 0.4341 MGEENKVVGEGEKKKEESVDATAVVGDGEEEKNNKKKKSKKQGLISRIWNGIFRRRSDDFEKRLQYISKEEAAVMARVNRRNRSWRRTSRQIIIISVIFEAVAVGFAIMTTRSMDMNWKMRAIRVLPMFLLPALSSAVYSTYVSFTRMRDRKDQKILVKLRAERQAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGADSGLKVYVGDESNSAAPTGQSIDADPARSSGLRNRKTVHSRSISSGTSTPNVPDQQLVGAAGTDQTLTSEHNQLVVVEHHQPQSSTSQDGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEDFPFITYYCPHCRALNKPKQSDERVSSGNSPNMRFPKTDDGEAVVKTVSASAADSIIKSNNPLDTATPEIEEVSEVASSGEKNS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2912 416 MobiDBLite consensus disorder prediction 243 264 - -
Ahy16g2912 416 MobiDBLite consensus disorder prediction 390 416 - -
Ahy16g2912 416 MobiDBLite consensus disorder prediction 1 40 - -
Ahy16g2912 416 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 26 413 - -
Ahy16g2912 416 MobiDBLite consensus disorder prediction 350 374 - -
Ahy16g2912 416 MobiDBLite consensus disorder prediction 220 234 - -
Ahy16g2912 416 MobiDBLite consensus disorder prediction 1 37 - -
Ahy16g2912 416 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 298 348 IPR019273 -
Ahy16g2912 416 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 26 413 IPR040115 GO:0071786
Ahy16g2912 416 MobiDBLite consensus disorder prediction 220 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2912 Ahy-Chr16 143435934 143440547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2912 K23292 - gmx:100815496 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2912 16 143435934 143440547 Ahy18g2556 18 127362143 127366610 PCT
Ahy18g2556 18 127362143 127366610 Ahy16g2912 16 143435934 143440547 PCT