Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1438 ATGAGGATGATTTCCAAAACACCTTTAGTGTTCATTATCTCTCTTCTATTGCTGGTTAATGTCCATGGTCGCTATCTACTTCCAAATCATGCTTCTGAAGAATTAGTTTCAGATGGAGTTGAAGAAGTTGATGATCATAGTGTTCACCCCAACAGAACTTCTTATTTGCTACTCAAAGGAATTGATGAAGATCATAACTGTGACCAAATTTACGGATTTCTGCCATGCACAAACAACATATTTGGGAATCTCTTTCTAATTTTGGTGTATGGATACATGCTTTTTCATGGAGAATCGTTTCTGAGTAGAGGGACTCAACGAATCTTCAAGATTCTTGGCCCTGGTATCTTTGGTGCTACTGCTTTTAACATCATTCCTGCTCTTCCAGAGTCCTTGATTCTTCTTGTTCCAGTACTACTTGTGAACAATGGAAAGATAGCAGAAGAATATGCTATGATTGGAATTGGATCATTGGCTGGATCATCAATCTTGCTTCTGACTATAGTTTGGGGAACATGTGTTATCACTGGCAGCAAAGATTTTGAGCACAGTGAAGGATCTAACTCATCATCATCATCATCATCATCATCACCATCATCACCATCACCTACAACTCTCAAACCTTTATTCACTAGTCATGGCATTACTATAGATTTGGAGACAAAACAAGCAGCAAGCAATATGTTAGGTTCAACAATTTTATTACAATTATCTTATGGGACAACAACTGTGCAATCGATAATTGGTCTCATCTTTGCTTCCCTTCTTCTCTTCTTTTATTTTACTAAACAGGTTTTTGAACCTTGGCGACAGAAAAGAAGATTGGAATACTTGAAACATGATGATTTAATGTTAAGAATACTAAGTTTTGTAGAAAAGAATACTCTACAAAGGATACTCACCAAGAATGGGACTCCAAATGTGACTGCCATTAGAAGGTTGTACAGTGAAATAGATGAAGATAGGAGCAGTGGCATATCAGCTTCTGAACTAAGAGACCTATTGCTACGAAACAAAGTAACAGACACAAGTATCGACGAGGAGAAAGAAATAGAAGAGGTATTGAAATTTTTTGAACATGGTCATGATCAAATGATAACCAAGGATGAGTTTGTTGTTGGCTTTGCAAAGTGGCTTGATCAAACAAAGCATGATTTGGATAAAGAGTATCTTTCAAGGAAATCAATGAAGGACTTATATGAGGTTTTTGGGCCATGGACTAAAAACAAAAGAAAAGAAAGAGAAGGGAAGAAACGAGTCATATCTGAAATATTAAGGCATGTTCAGAATGATATGGTTGGAAGCCTTCTCAGAAATGATGGAAAACCTGATGAGATAGCCATCAAAAGGTTGTTCGAAAAAATTGACCGCAACAAAGACAACTGCGTCTCGCAATCTGAACTGAAAGAACTAATGATGAACATCACATTTGTTAAAGCATCAATGGAAGTGGAGAAAGCAGTTGCTTTAGTCATTGATGAACTTGACCATGACATAGACCAGATAATCAATGAGGAGGAATTTGTTGCTGTGTTTGAGAAATCACTTAACAAAATTTCAAGTCATGCTCCTTTTTCTGATCCTGACTCTGAAGAAGATATATATCAAGCATGGGAAGAGGCAGGCATGGTGGTGGAAAATAAAGAAAGCAAAGCAATAGTAGATAAATCAATATGGGGAAGGTTGATGGCCACAACAAATGTGGTGCTAGGAATTGTTATTATATGCATTGTGGCACAACCGCTTATGGAAAGTGTCAGAAAATTCTCCAACAGTTTAGGAGTTCATGCTGCCTTTGTCTCATTTGTTCTAGTCCCCTTGGCCATAAATGCAAGGGAAGCAACTACAGCAATTAAAAAAACAAGCTATAAGAATTCTAGGACTATTTCTCTTGCTATTTCTGAGATATATGGAGGGGTTCTCATGAATAACATTGTTGGATTTTTTGCTATCTCCATTATGATCTATGTCCGACAAGTCACTTATGTATTCCCATCAGAATTGATGGTCGCTACACTTGTTTGTCAGATTATAAGCGTTATTTTAGGTTGTCACTACACTTTCTCTCCATGGTCATGTGTGTATGCTTACTTCACATATTTTTTCTCCTTGGTTTGGAGTTTTTGTATTTAG 2133 0.3699 MRMISKTPLVFIISLLLLVNVHGRYLLPNHASEELVSDGVEEVDDHSVHPNRTSYLLLKGIDEDHNCDQIYGFLPCTNNIFGNLFLILVYGYMLFHGESFLSRGTQRIFKILGPGIFGATAFNIIPALPESLILLVPVLLVNNGKIAEEYAMIGIGSLAGSSILLLTIVWGTCVITGSKDFEHSEGSNSSSSSSSSSPSSPSPTTLKPLFTSHGITIDLETKQAASNMLGSTILLQLSYGTTTVQSIIGLIFASLLLFFYFTKQVFEPWRQKRRLEYLKHDDLMLRILSFVEKNTLQRILTKNGTPNVTAIRRLYSEIDEDRSSGISASELRDLLLRNKVTDTSIDEEKEIEEVLKFFEHGHDQMITKDEFVVGFAKWLDQTKHDLDKEYLSRKSMKDLYEVFGPWTKNKRKEREGKKRVISEILRHVQNDMVGSLLRNDGKPDEIAIKRLFEKIDRNKDNCVSQSELKELMMNITFVKASMEVEKAVALVIDELDHDIDQIINEEEFVAVFEKSLNKISSHAPFSDPDSEEDIYQAWEEAGMVVENKESKAIVDKSIWGRLMATTNVVLGIVIICIVAQPLMESVRKFSNSLGVHAAFVSFVLVPLAINAREATTAIKKTSYKNSRTISLAISEIYGGVLMNNIVGFFAISIMIYVRQVTYVFPSELMVATLVCQIISVILGCHYTFSPWSCVYAYFTYFFSLVWSFCI* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1438 710 Pfam EF-hand domain pair 447 512 IPR002048 GO:0005509
Ahy18g1438 710 ProSiteProfiles EF-hand calcium-binding domain profile. 443 478 IPR002048 GO:0005509
Ahy18g1438 710 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 8 392 - -
Ahy18g1438 710 SMART efh_1 310 338 IPR002048 GO:0005509
Ahy18g1438 710 SMART efh_1 447 475 IPR002048 GO:0005509
Ahy18g1438 710 SMART efh_1 350 378 IPR002048 GO:0005509
Ahy18g1438 710 SMART efh_1 487 515 IPR002048 GO:0005509
Ahy18g1438 710 Gene3D - 376 520 - -
Ahy18g1438 710 ProSitePatterns EF-hand calcium-binding domain. 456 468 IPR018247 -
Ahy18g1438 710 Gene3D - 263 375 - -
Ahy18g1438 710 Pfam Sodium/calcium exchanger protein 568 708 IPR004837 GO:0016021|GO:0055085
Ahy18g1438 710 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 561 708 - -
Ahy18g1438 710 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 399 522 - -
Ahy18g1438 710 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 561 708 - -
Ahy18g1438 710 MobiDBLite consensus disorder prediction 185 204 - -
Ahy18g1438 710 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 399 522 - -
Ahy18g1438 710 SUPERFAMILY EF-hand 308 512 IPR011992 -
Ahy18g1438 710 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 8 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1438 Ahy-Chr18 27762179 27767443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g1438 399 704 EF-hand Containing Proteins AT1G53210 35.110 4.27e-49 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1438 - - aip:107612772 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0952 18 12171155 12174102 Ahy18g1438 18 27762179 27767443 ECH
Ahy18g1438 18 27762179 27767443 Ahy18g1438 18 27762179 27767443 ECH