Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0952 ATGAATATATATAAAGGAGAAGAAATACAAAGTTCCTTTCAAGTTACAAGTATTCTAAAGACCATGAGACACAAGTTTTCATTCATTTACCTTGTCATATTCTTGCTCATATTACCACATTCTAATTATGGTAGACCTATCACAAAAGAGGCACCTCTATTGATGGTTTCTGATGGAATCCATGATCATAGTAGTGAGCCTTCTCTTATTTATGTGAACAAGCTAGGTTCTTCAGATACATGCACAGAAGCTTATGGATTTTTGCCCTGTACAAATAATGCTCTAGGTAATGTGTTCCTCATGTTGGTGTATGGCTACTTTATGTTCTTGGCAGCAAAGTCATTATCAGCTGGCAGTGAGATTTTGCTTCAAATTCTTGGACCTGGCATCATTGGTGGACTATTCCTCCCTCTCTTGAGTTCTCTTCCTGATGCAACCATCATTCTTGCATCTACATTATCTGGGAACAAAGAAACAGCTCAAAGTCAGGTCTCTGTGGGAATGGGACTACTTGCTGGATCAACTGTAATGCTTCTAACTATTCTATGGGGTTCCTGTCTTATAGTTGGAAGGTGTGACCTTGAAAATTCAGTAGCAATTGATCAAAAGGATACAAAAGGCTTTGACTTAGCTGGATCTGGTGCAAGCACTGATATTTGGACAAGCTATGCTGCAATGTTGATGATAATATCTTGCATTCCACTTGTTATTGTGCAATTACCCCAAATTTTTCATGGAGCTACTCCAAGTCGCGCAGCCATTCTATTTTCGCTCATTGTCTCCATTTGTTTATTGGTTGTCTATACCATTTATCAGGTTTGTCAGCCAAGGATTCAGAGGAGAAGACTTGCATATGCCAAGTACAAGAACATAATGTCAGGATTTCTAGAACAATTGAAAACACAAACAAGAGGCCGTTTCCTCAAAGACAATGGTGAACCTCACATTGAGGTTATACAAAAGTTGTTTGACTCACTCAAGAATTCTGAAGGGTACATAACAGCCAAAGATTTAAGAGCTTTAATCATAGGAATGCACTTTGAGGAGGAAGATATGGACATTGATGAAGCTGTTGCAAGCATCATGTTGGATTTTGACAAGTCACATGACTCTAGAATTGACATGGAAGAGTTTGTGAGAGGAATAACAAGATGGCTTAGCAAAGCTACGCGATCCGCCACACACGACAATGATCACAGTCCCACAACACCTAAGATTCTAAATGATTTCCATCAGAGGATGAAAGCAGAACAAGATGTATGGAGTGATCACAGTGATGAGGCTGTGGAGAGTGTAAAGAATCCAAGATGGAATACTTTCAAAGCAGTGTTGATGTTGCTTCTAGGAACTGCTGTGGCTGGTGTATTTGCTGATCCTCTTGTTGATTCAGTGGACAACTTCTCAGCAGCCACTAGTATCCCTTCTTTCTTTGTTTCCTTCATCATCCTTCCTTTCGCCAGCTCCAGCGAAATTGTGTCGGCTCTTATTTTCGCCAGCCGGAAGAAGATCAGAACCGCCTCACTCACATATTCTGAGATATATGGATCAGTGACAATGAGCAATCTCCTTTCATTATCAGTTTTCTTGGGTTTGGTTTACATTCAAAACCTGACATGGAGTTTCTCAGCTGAGGTTTTGATCATTCTCATTGTGTGCATAACAATGGGACTTGTTGCAAGCTTTCACACTACCTTGCCTCTATGGCTATGCTTCCCTGCCTTTGCACTTTATCCATTCTCTCTGCTTTTCGTCTATATTCTTAATTATGTTGTTGGAATACCTTAA 1785 0.3994 MNIYKGEEIQSSFQVTSILKTMRHKFSFIYLVIFLLILPHSNYGRPITKEAPLLMVSDGIHDHSSEPSLIYVNKLGSSDTCTEAYGFLPCTNNALGNVFLMLVYGYFMFLAAKSLSAGSEILLQILGPGIIGGLFLPLLSSLPDATIILASTLSGNKETAQSQVSVGMGLLAGSTVMLLTILWGSCLIVGRCDLENSVAIDQKDTKGFDLAGSGASTDIWTSYAAMLMIISCIPLVIVQLPQIFHGATPSRAAILFSLIVSICLLVVYTIYQVCQPRIQRRRLAYAKYKNIMSGFLEQLKTQTRGRFLKDNGEPHIEVIQKLFDSLKNSEGYITAKDLRALIIGMHFEEEDMDIDEAVASIMLDFDKSHDSRIDMEEFVRGITRWLSKATRSATHDNDHSPTTPKILNDFHQRMKAEQDVWSDHSDEAVESVKNPRWNTFKAVLMLLLGTAVAGVFADPLVDSVDNFSAATSIPSFFVSFIILPFASSSEIVSALIFASRKKIRTASLTYSEIYGSVTMSNLLSLSVFLGLVYIQNLTWSFSAEVLIILIVCITMGLVASFHTTLPLWLCFPAFALYPFSLLFVYILNYVVGIP* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0952 594 CDD EFh 321 383 IPR002048 GO:0005509
Ahy18g0952 594 PANTHER ION BINDING PROTEIN, PUTATIVE-RELATED 24 588 - -
Ahy18g0952 594 Gene3D - 126 285 IPR044880 -
Ahy18g0952 594 Gene3D - 310 413 - -
Ahy18g0952 594 SUPERFAMILY EF-hand 313 386 IPR011992 -
Ahy18g0952 594 Pfam Sodium/calcium exchanger protein 100 273 IPR004837 GO:0016021|GO:0055085
Ahy18g0952 594 Pfam Sodium/calcium exchanger protein 442 585 IPR004837 GO:0016021|GO:0055085
Ahy18g0952 594 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 24 588 IPR004713 GO:0006812|GO:0008324|GO:0016021
Ahy18g0952 594 ProSiteProfiles EF-hand calcium-binding domain profile. 353 388 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0952 Ahy-Chr18 12171155 12174102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0952 55 592 EF-hand Containing Proteins AT1G53210 56.261 0.0 602
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0952 - - qsu:112040079 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0952 18 12171155 12174102 Ahy18g1438 18 27762179 27767443 ECH
Ahy18g0952 18 12171155 12174102 Ahy18g0952 18 12171155 12174102 ECH