Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g1065 ATGGAGTCAATACTAGCTCGTGCACTAGAGTACACGCTCAAGTATTGGCTCAAATCCTTCTCCAGAGAGCAGTTCAAGCTCCAAGGCCGCACTCTAAGTCTCTCCAATTTAGATATCGATGGTGATGCCTTGCATTCCAGCTTGGCCTTGCCACCTGCGCTTAACGTTTCCACAGCTAAAGTTGCCAAATTGGACATCATGCTTCCTTCCGTGAGTAATGTGCAAGTAGAGCCGATCATTGTGCAAATTGATCGGCTTGATCTAGTTCTGGAGGAGAATTCTGATTTTGATGCATCTGTTAGTAGTACCAACAGTGCCACTTCATCGGCTGCCACCTCGAAGGGTAGTGGTTATGGTTTCGCTGATAAGATTTCTGATGGCATGACTATACAAATTCACACAGTTAATCTATTACTTGAAACTCGTGGTGGTGGGGGCGCGCGTCGAAAAGTGGGAGCAACATGGGCACCACCAATGGCATCTATCACAATACATAACCTTTTGCTGTATACCACAAATGAGAGCTGGCAGGTTGTAAATCTTAAGGAAGCACGGGAATTCTCCAGTAACAAGAAATATATATATGTCTTCAAAAAACTAGAATGGGAATCTTTGTCTATTGATCTTTTGCCTCATCCTGACATGTTCGCGGATGCTGCATTAGGCTTCTCTGAAGAGGGATCAAACCTGAGAGATGATGATGGTGCAAAGCGAGTATTCTTTGGAGGAGAGCGTTTTATTGAAGGAATATCAGGAGAAGCATATATAACAGTTCAGAGAACTGACTTGAACAGTCCACTTGGGCTTGAGGTTCAGTTGCACATCAATGAAGCTGTTTGCCCTGCACTAAGTGAACCTGGGCTACGCGCACTTCTCCGCTTTATGACAGGATTATATGTCTGTCTAAACAGGGGCAATGTTGATTTAAAGACTCAGCAGCGATCAACTGAAGCTGCTGGGCGTTCTCTGGTCTCGATCGTTGTAGATCATATATTTCTTTGCATTAAAGATACTGAATTCCAGCTTGAGCTTTTGCTGCAGTCCCTCTTTTTCTCTCGGGCCAGTCTTTCTGAAGGAGAGAATGACAATAACTTGACCAAGATTACAATTGGTGGAATAATTTTAAGGGACATCTATTCATCTCCGCAGTGTACACTAGTGCAACCATCGATGCAAGCTGTCACAAAAGATGCTTTCCATGTGCCTGAATTTGCTAGAAGCTTTTGCCCTCCAATATACCCTCTAGGAGAACAGCAGTGGCAAGTGATTGAGGGAATCCCTCTAATATGCCTCCATGCACTTCAAGTCATGCCTTCACCACTTCCACCATCCTTTGCTTCTCAGACAGTTATTGATTGTCAGCCTCTTATGGTTCATCTTCAGGAGGAAACATGCCTGAGGATATCCTCATTCTTAGCTGATGGTATTGTTGTCAGTCCTGGTGACATTCTACCGGACTTCTCAATAAAATCTTTTATTTTCAGTCTCAAGGGGCTTGACCTTACAGTTCCACTAGACAACATTGAAACTGATATTTCTAAAATCTATATGGATAATAATACAGTTCAGACCTCCTTCACTGGAGCAAGACTCCAAATTGAAAACCTTTCCTTTTCTGATTCACCCTCATTGAAACTAATAATGCTGAACCTGGAAAAGGATCCTGCTTGTTTTAGTCTTTGGGAAGGTCAACCGATCGATGCTAGCCAGAAGAAGTGGACTGCCAGAGCATCGCAGCTTACTTTGTCCCTGGAGGCATGTAATGACAAAATCAAACTTCAAAATTACCTTGGACAAACTGGAGGACTGTTGAGATGTGTTGATCTCAAAGATGCTTGCATTGAAGTAGCTATGGCAACTGCTGATGGCAGTCCACTGTTACATATTCCTCCTTCAGGGGGTATTGTCAGGGTTGGAGTTGCTTGTGGACAGTATCTATCCAACACTTCTGTTGAACAATTATTTTTTGTCCTGGACGTCTATGGTTATTTTGGGCGAGTTAGTGAGAAAATAGCTATGGTTGGGAAAAGGAAACAACTAGAGGACGTTAGAGACAAGTCTTTTAGTGGAAAGCTGATGGACAAGGTTCCCAGTGACACTGCTGTGAGTTTAACAGTAAAGGACCTCCAACTTAGATTTCTAGAGTCTTCGGTGAATGTTGAGGGAATGCCTTTAGTACAGTTTATCGGAGATGATCTATTCATTAATGCCGCCCATAAAACCCTTGGAGGGGCTATTGTTGTTTCATCTACTTTACGGTGGGAGAGTGTCCAGATAGATTGTGTGGATGCTGAGGGGCACTTACCATGTGAAAATGGATCATTCTTGAGTCCTAGCGAAAATGTTCCCTCACCAAGTGATAATGGATATCCTCATCTTAGAGCTGTTTTTTGGGTAGATAAGAATAAGAAACATCCAATGAATGGAAATGCTCATTCAATCCCTTTTCTAGACATCAGTATGGTTCATGTCATTCCACTAAATGAGCAAGATATGGAGTCTCATAGTTTAAATGTGTCAGCTTCTGTTTCTGGTGTTCGACTTGGTGGAGGAATGAACTATGCTGAAGCCCTCCTGCATAGATTTGGAATACTTGGACCTGATGGAGGCCCTGGGACAGGCCTTTCAAAAGGGTTGGAAAACTTACAAAAAGGACCCTTATCAAAACTTTTTAAGACAACACCTCTCATGGTTGATAATTCAGAAGATGCTGAAAGTATGAGACAAGGGGAGGAAACCAGTTTTCCACACCTGAAGAAGCCAGATGACGTGGATGTAACTATAGAATTGAGAGACTGGTTATTTGCTCTTGAAGGTGCAGATCAGATGGCTGAACAGTGGTGGTTCTCCAGTCTTGAGGTTGTAGACAGAGAAGAGAGGTGTTGGCACACAACTTTCCGTGGTTTACGAGTAAATGCAAAAAGTAGCCCAAAGAAGGTTCTGGATGGCAAAGCACAATTGCATCGGATAAAACAAAATCCAATAGAGCTTGTTACGGTAGGAATTGAAGGGCTACGAATATTAAAGCCTCATATCCAAAAGGGCAATCCTCCATCAATGTTAATTGCAAACGGGGATAAAGAAAATAGTAACACAACTGAGGGAGTTGGTCTTGAAGTTCGCTTGATATTATGTGAGGACAACACTGATGACATAGTGAATTGGGAAGTGGAAGACATAAAGTTCGCTGTTAAACAACCGATTGAAGCAGCAGTAACCAAGGATGAGCTTCAGCACCTCACTTTGCTGTGCAAATCTGAAATTGATTCGATTGGCCGAATCACTGCTGGAGTTTTGCGGCTGCTTAAGCTGGAAGGTTCTGTTGGTCAGGCTGTAATAGATCAACTTGGTAACCTAGGAAGCGAGGGCATTGACAAGATTTTCTCTTCTGAAAAGGTTACCAGAGATGGTAGTGTTGTTGGTAATAGAGGACATTCTCCCTTACCAAGCGGGGTTAATGAAGGACCACACAAAACCATGGAAGAGACATTAACTCAGCTTGAGGAAGTAGTTGTAGAGTCACAGGCTAAACTCAGTGAACTAATCACTCATGTTGGTACTTCGGACTCTTCTTCCACTCAGCACCGTACCATTGTCAAACTAAGTCAAAAGATTGAGACCATGCAGGGCCTATTGATGCAGTTGAGGAATCAACTTTAA 3660 0.4287 MESILARALEYTLKYWLKSFSREQFKLQGRTLSLSNLDIDGDALHSSLALPPALNVSTAKVAKLDIMLPSVSNVQVEPIIVQIDRLDLVLEENSDFDASVSSTNSATSSAATSKGSGYGFADKISDGMTIQIHTVNLLLETRGGGGARRKVGATWAPPMASITIHNLLLYTTNESWQVVNLKEAREFSSNKKYIYVFKKLEWESLSIDLLPHPDMFADAALGFSEEGSNLRDDDGAKRVFFGGERFIEGISGEAYITVQRTDLNSPLGLEVQLHINEAVCPALSEPGLRALLRFMTGLYVCLNRGNVDLKTQQRSTEAAGRSLVSIVVDHIFLCIKDTEFQLELLLQSLFFSRASLSEGENDNNLTKITIGGIILRDIYSSPQCTLVQPSMQAVTKDAFHVPEFARSFCPPIYPLGEQQWQVIEGIPLICLHALQVMPSPLPPSFASQTVIDCQPLMVHLQEETCLRISSFLADGIVVSPGDILPDFSIKSFIFSLKGLDLTVPLDNIETDISKIYMDNNTVQTSFTGARLQIENLSFSDSPSLKLIMLNLEKDPACFSLWEGQPIDASQKKWTARASQLTLSLEACNDKIKLQNYLGQTGGLLRCVDLKDACIEVAMATADGSPLLHIPPSGGIVRVGVACGQYLSNTSVEQLFFVLDVYGYFGRVSEKIAMVGKRKQLEDVRDKSFSGKLMDKVPSDTAVSLTVKDLQLRFLESSVNVEGMPLVQFIGDDLFINAAHKTLGGAIVVSSTLRWESVQIDCVDAEGHLPCENGSFLSPSENVPSPSDNGYPHLRAVFWVDKNKKHPMNGNAHSIPFLDISMVHVIPLNEQDMESHSLNVSASVSGVRLGGGMNYAEALLHRFGILGPDGGPGTGLSKGLENLQKGPLSKLFKTTPLMVDNSEDAESMRQGEETSFPHLKKPDDVDVTIELRDWLFALEGADQMAEQWWFSSLEVVDREERCWHTTFRGLRVNAKSSPKKVLDGKAQLHRIKQNPIELVTVGIEGLRILKPHIQKGNPPSMLIANGDKENSNTTEGVGLEVRLILCEDNTDDIVNWEVEDIKFAVKQPIEAAVTKDELQHLTLLCKSEIDSIGRITAGVLRLLKLEGSVGQAVIDQLGNLGSEGIDKIFSSEKVTRDGSVVGNRGHSPLPSGVNEGPHKTMEETLTQLEEVVVESQAKLSELITHVGTSDSSSTQHRTIVKLSQKIETMQGLLMQLRNQL* 1220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g1065 1219 Coils Coil 1157 1177 - -
Ahy18g1065 1219 Coils Coil 1198 1218 - -
Ahy18g1065 1219 Pfam N-terminal region of Chorein or VPS13 1 104 IPR026854 -
Ahy18g1065 1219 PANTHER UNCHARACTERIZED 1 1218 IPR026728 -
Ahy18g1065 1219 MobiDBLite consensus disorder prediction 1136 1157 - -
Ahy18g1065 1219 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 1218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g1065 Ahy-Chr18 15796151 15803809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g1065 - - ahf:112802603 1943.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1065 18 15796151 15803809 Ahy18g1065 18 15796151 15803809 ECH
Ahy18g1065 18 15796151 15803809 Ahy8g1800 8 36181819 36189437 hybridization
Ahy18g1065 18 15796151 15803809 Ahy13g1722 13 27233513 27243809 PCT
Ahy13g1722 13 27233513 27243809 Ahy18g1065 18 15796151 15803809 PCT