Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1722 ATGGAGTCGATCCTAGCGAGAGCTCTGGAGTACACTCTCAAGTATTGGCTCAAATCCTTCTCCAGAGAGCAGTTCAAGTTGCAGGGTCGCACTGTTCAGCTCTCCAATTTAGATATAAATGGTGATGCATTGCATGCTAGCGTTGGATTGCCACCTGCACTCAATGTAACCACCGCCAAAGTTGGCAAATTGGAGATTATGCTACCGTCAGTGAGCAGTGTGCAGATAGAGCCAATTTTTGTGCAAATTGATCGGTTGGATTTGGTTCTAAAGGAGAATTCTGATTATGAAAGGCCGCCCGAGAATCATGCTAGCATCACGCCATCAAGTGCCTCTTCAAAGGGTAGTGGTTATGGTTTTGCTGATAAGATTTCAGATGGAATGACTATACAAATTCAAACAGTTAATTTATTACTTGAAACTCATGGGGGTGCCCGTCCCCAAGGGGGAGCAGCATGGGCACCTCCTATGGCATCTGTCACCATACGCAATTTGTTGCTGTATACAACAAATGAAAGCTGGGAGGTTGTAAATCTTAAGGCGGCAAGGGAGTTCTCAAGCCGCTCTCAAGAGCGAGCAAACATGAGAGATGATGATGGTGCAAAACGAGTATTCTTTGGAGGGGAGCGTTTTTTAGAAGGAATATCAGGAGAAGCATATATCACAATTCAGAGAACAGTCTCCAACAGTCCACTTGGGCTTGAGGTTCAGTTGCACATTACAGAAGCCCTTTGCCCTGCATTAAGTGAGCCAGGACTTCGTGCACTTCTCCGCTTTATGACAGGATTATCTGTCTGTCTAAACAGGGGAGATGTAAATTTGAAGGCCCAGAAGAGATCTACTGAAGCTGCTGGGCGCTCTCTTGTCTCAGTTGTTGTGGACCACATATTTATTTGCATCAAAGATTCTGAGTTCCAGCTTGAACTATTAATGCAGTCCCTTTTTCTGTCTCGGGCAAGTCTTTCGGAGGGAGAAAATGACAGTAGTTTGACCAGGATTACCATTGCAGGTCTATTTTTAAGTGACAAGTTTTCACACCCGCCATGTACGTTAGTGCAGCCATCTATGCATTCTGTTAAAAGAGAGTCTTTTCATGTGCCAGAATTCGCTAGAAGCTTTTGCCCTCCAATATATCCACTTGGAGAACAGCAGTGGCAATTGATTGAGGGAACTCCTCTAATCTGCCTTCATTCCCTTCAGATTGTGCCTTCTCCACTTCCACCAGTTTTTGCTTCTCAAACAGTTATTGACTGTCAGCCTCTTATGATTCATCTTCAGGAAGAAGCTTGCCTTAGAATATCTTCTTTCTTAGCTGATAGAATTGTTGTCAATTCTGGTGATATTTTACCAGATTCCTCAATAAACTCTCTTTTCTTCACTCTCAGTGGACTGGATATTATGGTTCCTCTGGACAAGGCCCAGTTGGATATTTCTAAAAGCAACACAGATAATGTAGTCCAAACCTCCTTTGCTGGTGCAAGGCTTCATATTGAAGACTTTTCATATATAGATTCACCATCAATGAAACTAAGAATGCTTAAACTGGATAAGGATCCTGCTTGTTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCCAGAGAAAGTGGAGTGCCAGAGCAGCCCAGATTACTTTATCTCTGGAAGCATGTACTGGCCCACCTGCACGTCAAAATTCTCTTGGATGGACCACAGGACTATGGAGATGTGTTGTTCTGAAAGGTGCTTGGATTGAAGTAGCTATGACAACTGCCGATGGCAGTCCATTGTTAAAGGTTCCTCCTCCAGGAGGTATTGTGAGAGTTGGTGTTGCTTGTGAACAGTTTCTGTCCAATAGTTCTGTTGAACAATTATTTTTTATCTTGGATCTTTACGTGTATTTTGGGAGAGTTAGTGAGAAAATAGCAGTGGCTGGAAAAAGGAAACAATTGGAGGGGGTTAAGAACAAATCTTCTAGCGAAAAGTTAATGGACATAACTCCTAGTGACAGTGCTGTAAGTTTAGCAGTTAAAGACCTTCAACTTCGATTTCTTGAGTCTTCACCATTGAATGTCGAGGGAATGCCTCTAGTGCAGTTTGTTGGAAATGATTTGTTAATTAGTGCCACTCATAGAACCTTTGGTGGTGTTATTGTTATTTCGTCCACCTCACGCTGGGAGAGTGTTCAGATAGATTGCGTGGATGCTGAGAAGCACATAGCAGGAGAGAATGGCTCATTCTTAAGTTCTGGAGAAAATATTCCTTCAAGCAGTGGAGACTGTCAACTGAGAACTGTATTCTGGATACATAACAAGAGGAACCATCTATTGAACAGAAATGCTCCTTCAATCCCTTTTCTGGATGTAAACATGGTGCATGTCATACCATTGGGGGAACAAGATAGAGAGTCTCATTGTTTGAATGGCTCAGCTTCTGTATCTGGTATTCGTCTTGGTGGGGGAATGAACTATGCTGAAGTCCTCCTACATCAATTTGGAATACTTGGTCCTGATGGTGGTCCTGGGAAGGGTCTTTGTAAAGGCTTAGAAAAGTTACAGGCAGGACCATTGGCAACAATTTTCAAGACAACGCCTCCCGATGTTGATAATTCAGAAGATGGAAGTTTGAGCAAAGGGAAAGAAACCAGTTTTCCAAAATTGAAGAAGCCAGATAATGTGGATATAACCATAGAATTGAGAGACTGGTTATTTGCTCTTGAAGGGGCACAAGAGATGGCTGAAAGGTGGTGGATATCTAGCCCAGAAAATGTAAGTAGAGAAGAGAGGTGTTGGCACACAACTTTCCAAAGTTTGCAAGTAATTACAAGAAGCAGCCCAAAGAATGTTCTGGGTGAAAAAGCGCCAGCACGTAGAAAACAACAGTATCCTGTGGAACGGGTTACAGTTGGAATCCAAGGGCTGCAGATCATGAAGCCGCAGAGACCGAAAGAGATTCATTTGTCAAAATCAATTGCAAATGGTGCTAAAGAAGTTAACGGCACTGCTACAGGAATTTGTCTTCAGCTGGATTTGGTATCAAGTGAGGATAATGTTGAAGTTGAAATGGCTAATTGGGAAGTGGAAAATCTAAAGTTCACTGTTAAGCAACCGATAGAGGTGGTTTTAACCAGTGATGAGGCTCAACACCTTACTTTTCTGTGCAAATCTGAAGTTGATTCCATGGGCCGGATAGCAGCTGGAATTCTAAGAGTGCTTAAGCTCGAAGGTTCGGTCGGCCATTCTGTAATGGATCAACTAGGCAACTTAGGAAGTGAAGGCATTGACAAGATTTTCTCTCCTAAGCATAGCAGAGATGATAGTGTCCACAATAGAGGATTTTGTCCATCACCGAAGCTGGTAAGCAAAAGCTTGCACAAATCAACGATGGAACCGACATTAACTTTGCTCGAGGAAGCAGTTGCAGATTCACAGGAAAAGATCAATGCCTTAATCAGTGATTTTGGTATTTCAGAGTCCTCTGGGCAGCAACTTACCATTGCTAAAGAACTCAGTCAAAAGATTGAATCAATGGAGGGTTTATTGAAGCAATTACGGAATAAAACTTAA 3546 0.4264 MESILARALEYTLKYWLKSFSREQFKLQGRTVQLSNLDINGDALHASVGLPPALNVTTAKVGKLEIMLPSVSSVQIEPIFVQIDRLDLVLKENSDYERPPENHASITPSSASSKGSGYGFADKISDGMTIQIQTVNLLLETHGGARPQGGAAWAPPMASVTIRNLLLYTTNESWEVVNLKAAREFSSRSQERANMRDDDGAKRVFFGGERFLEGISGEAYITIQRTVSNSPLGLEVQLHITEALCPALSEPGLRALLRFMTGLSVCLNRGDVNLKAQKRSTEAAGRSLVSVVVDHIFICIKDSEFQLELLMQSLFLSRASLSEGENDSSLTRITIAGLFLSDKFSHPPCTLVQPSMHSVKRESFHVPEFARSFCPPIYPLGEQQWQLIEGTPLICLHSLQIVPSPLPPVFASQTVIDCQPLMIHLQEEACLRISSFLADRIVVNSGDILPDSSINSLFFTLSGLDIMVPLDKAQLDISKSNTDNVVQTSFAGARLHIEDFSYIDSPSMKLRMLKLDKDPACFCLWEGQPIDASQRKWSARAAQITLSLEACTGPPARQNSLGWTTGLWRCVVLKGAWIEVAMTTADGSPLLKVPPPGGIVRVGVACEQFLSNSSVEQLFFILDLYVYFGRVSEKIAVAGKRKQLEGVKNKSSSEKLMDITPSDSAVSLAVKDLQLRFLESSPLNVEGMPLVQFVGNDLLISATHRTFGGVIVISSTSRWESVQIDCVDAEKHIAGENGSFLSSGENIPSSSGDCQLRTVFWIHNKRNHLLNRNAPSIPFLDVNMVHVIPLGEQDRESHCLNGSASVSGIRLGGGMNYAEVLLHQFGILGPDGGPGKGLCKGLEKLQAGPLATIFKTTPPDVDNSEDGSLSKGKETSFPKLKKPDNVDITIELRDWLFALEGAQEMAERWWISSPENVSREERCWHTTFQSLQVITRSSPKNVLGEKAPARRKQQYPVERVTVGIQGLQIMKPQRPKEIHLSKSIANGAKEVNGTATGICLQLDLVSSEDNVEVEMANWEVENLKFTVKQPIEVVLTSDEAQHLTFLCKSEVDSMGRIAAGILRVLKLEGSVGHSVMDQLGNLGSEGIDKIFSPKHSRDDSVHNRGFCPSPKLVSKSLHKSTMEPTLTLLEEAVADSQEKINALISDFGISESSGQQLTIAKELSQKIESMEGLLKQLRNKT* 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1722 1181 Coils Coil 1160 1180 - -
Ahy13g1722 1181 MobiDBLite consensus disorder prediction 96 115 - -
Ahy13g1722 1181 Coils Coil 1126 1146 - -
Ahy13g1722 1181 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 187 1180 - -
Ahy13g1722 1181 PANTHER AMINO-TERMINAL REGION OF CHOREIN, A TM VESICLE-MEDIATED SORTER 1 188 - -
Ahy13g1722 1181 Pfam N-terminal region of Chorein or VPS13 1 97 IPR026854 -
Ahy13g1722 1181 MobiDBLite consensus disorder prediction 856 880 - -
Ahy13g1722 1181 PANTHER UNCHARACTERIZED 187 1180 IPR026728 -
Ahy13g1722 1181 PANTHER UNCHARACTERIZED 1 188 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1722 Ahy-Chr13 27233513 27243809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1722 - - adu:107477991 2262.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g1065 18 15796151 15803809 Ahy13g1722 13 27233513 27243809 PCT
Ahy8g1800 8 36181819 36189437 Ahy13g1722 13 27233513 27243809 PCT
Ahy13g1722 13 27233513 27243809 Ahy18g1065 18 15796151 15803809 PCT
Ahy13g1722 13 27233513 27243809 Ahy8g1800 8 36181819 36189437 PCT