Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0835 ATGAGGCGAAGAGGTGCGGATTTTCGGAGGCCGGTGAGGAGGAGGATCCCTGATGCGTTGTGGTGGGCATTGTGCTGTGGAGTGGTTATCCTCTTTGTCTATATTCTCAGCAAAGGGAACCAGATTGAGTCAAGACCAGCTTTGGCACAGAGAACTTACAAGCATGATAAGATTATGGAAGGCCTTAATATTACTGATGAGATGTTAAGTCCTAACTCGGTGAGCAGACAACTTAATGATCAGATATCCCTAGCAAAAGCTTTTGTCGTGATTGCAAAAGAAAGTAATAATTTACAATTTGCTTGGGAATTAAGTGCCCAGATCCGCAATTCACAAATTCTCCTCTCAAACGCTGCCACCAGGCGAGTTCCTCTATCAACTAGAGAATCTGAAAGTGCTATCCGTGATATGGCATTATTGTTATACCAGGCTCAGCAGCTCCATTATGACAGTGCAACCATGATCATGCGATTCAAAGCAAAAATTCAAGCGCTTGAAGAACAGATGAATTCTGTGACTGAAAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAGGTCCCGAAAAGTCTATACTGTCTTGGTGTCCGATTGACAACTGAATGGTTCAAAAACCTTAATCTGCAAAATAAATTGAGGGACAAAAGGCAAGTCGAGATGAAACTTAAGGATAACAATCTTTTTCATTTTTGTGTCTTTTCTGACAATATTCTCGCAACTTCAGTTGTTGTCAATTCAACATCGATAAGCTCTAAGAATCCTGATATGATTGTTTTCCACCTTGTAACTGATGAAATAAATTATGCGGCAATGAAGGCATGGTTTGCCATGAATGATTTCCGTGGGGTGACTGTGGAAGTTCAAAAGTTTGAAGACTTCATTTGGTTAAATGCTTCTTATGTTCCTGTGCTTAAGCAACTTCAAGACACAGAAACACAGAGCTATTACTTTTCTGGCAACAGTGGCGATGGCAGGACACCGATCAAGTTCCGTAACCCTAAATATCTATCCATGCTTAACCACCTGAGGTTTTATATACCTGAGGTATTTCCTGCACTAAAGAAGGTGGTGTTCTTGGATGATGATGTTGTAGTTCAAAAGGATCTTTCTGGTCTTTTCTCCCTTGACTTGAAGGGCAACGTCAATGGGGCTGTGGAAACATGCATGGAGACATTTCATAGATATCACAAATATCTAAACTATTCCCATCCTCTGATTCATACACATTTTGATCCTGACGCTTGTGGATGGGCATTCGGGATGAATGTATTTGATTTGGTTGAATGGAGGAAAAAGAATGTTACCGGCATCTACCATTATTGGCAGGAAAAGAATGTCGACCGGACATTGTGGAAACTTGGAACCTTGCCCCCTGGACTGTTGACTTTCTATGGATTAACGGAGCCCTTGGATCCATCATGGCATGTATTGGGTTTTGGCTACACAACCGTTGATCCTCAGTTGATAGAGAGAGGCGCCGTACTTCATTTCAATGGGAACTCCAAACCATGGTTGAAGATCGGCATTGAGAAGTACAAGCCCCTTTGGGAAAAATTTGTTGACTACTCTCATCCTTTGTTGCAACAGTGCAATTTCCATTGA 1602 0.4157 MRRRGADFRRPVRRRIPDALWWALCCGVVILFVYILSKGNQIESRPALAQRTYKHDKIMEGLNITDEMLSPNSVSRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSQILLSNAATRRVPLSTRESESAIRDMALLLYQAQQLHYDSATMIMRFKAKIQALEEQMNSVTEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFKNLNLQNKLRDKRQVEMKLKDNNLFHFCVFSDNILATSVVVNSTSISSKNPDMIVFHLVTDEINYAAMKAWFAMNDFRGVTVEVQKFEDFIWLNASYVPVLKQLQDTETQSYYFSGNSGDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSGLFSLDLKGNVNGAVETCMETFHRYHKYLNYSHPLIHTHFDPDACGWAFGMNVFDLVEWRKKNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTTVDPQLIERGAVLHFNGNSKPWLKIGIEKYKPLWEKFVDYSHPLLQQCNFH* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0835 533 CDD GT8_like_1 228 521 - -
Ahy18g0835 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 531 IPR029044 -
Ahy18g0835 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 4 533 IPR029993 GO:0047262
Ahy18g0835 533 Coils Coil 155 175 - -
Ahy18g0835 533 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 4 533 - -
Ahy18g0835 533 Pfam Glycosyl transferase family 8 234 507 IPR002495 GO:0016757
Ahy18g0835 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 229 526 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0835 Ahy-Chr18 9909319 9912799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0835 1 533 Glycosyltransferase AT2G20810 79.478 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0835 K13648 - gmx:100792018 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0835 18 9909319 9912799 Ahy18g0835 18 9909319 9912799 ECH
Ahy18g0835 18 9909319 9912799 Ahy8g1599 8 33098956 33102442 hybridization
Ahy18g0835 18 9909319 9912799 Ahy13g1504 13 20980441 20983792 PCT
Ahy13g1504 13 20980441 20983792 Ahy18g0835 18 9909319 9912799 PCT