Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g1504 ATGAGGCGAAGAGGTGCGGATTTTCGAAGGCCAGTGAGGAGGAGGGTGCAGGATGTGGCGTGGTGGACACTCTGTAGCGTAGTAGCTCTCTTATTTATTTATATTCTTGTCACCACCACCAAAGGCTCCAACACTACTAGTACTACCTCAATGCCCCCTTTCTCCTTGAGAAACTTCAGGAATGAAAGGATCATGGAAAGCCTTAATATTACTGAAGAGATGTTAAGCCCTGACTCAGTAGCAAGACAACTAAATGATCAAATATCTCTAGCAAAAGCCTTTGTTGTAATTGCCAAAGAAAGTAACAATCTCCAATTAGCTTTGTCCTTAACTTCCCAGATTCAAAATTTGCAGATTCTCCTCTCAAATGCAGCCACCAGGCGCGCTCCCTTGACAATAATGGAGTCAGAGAAAGCGATTCATGATATGGCATCATTGCTGTATCAGGCACAGCAGCTCCATTATGACAGTGCAGGCATGATCATGAGACAGAAAGCAAAGATTGAATCTCTTGAAGAACAGATGAATTATGTAAATGAAAAGAGTTCGAAATACGGACAAGTAGCTGCTGAAGAAGTCCCCAAGAGCCTATACTGCCTAGGTGTAAAGTTGACATCAAAATGGTTAAACAATTTCGATTTGCAGAACAAATTGATGGACAAATTGCAATCTGACATGAAACTTAGGGACAACAATCTTTACCACTTTTGTGTGTTCTCTGATAACATCCTTGCTACTTCAGTTGCAATCAACTCGACCGCGCAAAATTCTAAGAATCCAGATAGAATTGTTTTCCACATTGTCACGGATGAAATAAGTTATGCTGTTATGAAGGCATGGTTTGCTTTAAACGATTTTCGTGGTGTGACAGTTGAAGTTCAGAAGTATGAAGACTTCGATTGGTTAAATGCTTCATATGCTCCTGTGCTTAAGCAGCTCCAAGACTCAGAGATCCAGAGCTACTACTTTCGAGGAAGCAAAGACGATGGAAGTACTCCGATCAAGTTTCGGAACCCAAAATATCTCTCCATGCTTAACCACCTAAGATTCTACATACCCGAAGTCTTTCCGGATCTAAAGAGGGTGGTGTTCCTCGACGATGATGTCGTGGTCCAAAAGGATCTTTCTAAGCTTTTCTCAATTGATTTGAATGAAAATGTTAATGGAGCAGTTGAGACATGTATGGAGACATTTCATAGGTACCATAAATACTTGAACTATTCACATCCTTTAATTAGAGCACACTTTGATCCTGATGCATGTGGTTGGGCATTTGGGATGAATGTGTTTGATTTGGTTCAATGGAGAAAAATGAATGTAACTGGAATCTACCACTACTGGCAAGAAAAGAATGTAGATAGAACATTGTGGAAACTTGGAACATTGCCACCAGGGTTGTTAACATTTTATGGATTAACTGAGCCATTGGATCCATCATGGCATGTGTTGGGTTTTGGCTACACCTCTGTGGATCCTGTGTTGATAGAGAAGGGTGCTGTGTTGCATTTCAATGGAAACTCCAAACCATGGTTGAAGATTGGGATGGAAAAGTACAAGCCCTTGTGGGAAAAATACATGGATTATTCTCATCCTTTGTTGCAACAGTGCAACTTTCATTGA 1620 0.408 MRRRGADFRRPVRRRVQDVAWWTLCSVVALLFIYILVTTTKGSNTTSTTSMPPFSLRNFRNERIMESLNITEEMLSPDSVARQLNDQISLAKAFVVIAKESNNLQLALSLTSQIQNLQILLSNAATRRAPLTIMESEKAIHDMASLLYQAQQLHYDSAGMIMRQKAKIESLEEQMNYVNEKSSKYGQVAAEEVPKSLYCLGVKLTSKWLNNFDLQNKLMDKLQSDMKLRDNNLYHFCVFSDNILATSVAINSTAQNSKNPDRIVFHIVTDEISYAVMKAWFALNDFRGVTVEVQKYEDFDWLNASYAPVLKQLQDSEIQSYYFRGSKDDGSTPIKFRNPKYLSMLNHLRFYIPEVFPDLKRVVFLDDDVVVQKDLSKLFSIDLNENVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVQWRKMNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTSVDPVLIEKGAVLHFNGNSKPWLKIGMEKYKPLWEKYMDYSHPLLQQCNFH* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g1504 539 CDD GT8_like_1 234 527 - -
Ahy13g1504 539 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 4 539 IPR029993 GO:0047262
Ahy13g1504 539 Pfam Glycosyl transferase family 8 241 513 IPR002495 GO:0016757
Ahy13g1504 539 PANTHER GALACTURONOSYLTRANSFERASE 10-RELATED 4 539 - -
Ahy13g1504 539 SUPERFAMILY Nucleotide-diphospho-sugar transferases 234 537 IPR029044 -
Ahy13g1504 539 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 235 534 IPR029044 -
Ahy13g1504 539 Coils Coil 161 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g1504 Ahy-Chr13 20980441 20983792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g1504 1 539 Glycosyltransferase AT2G20810 73.801 0.0 824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g1504 K13648 - gmx:100792018 902.894
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g1504 13 20980441 20983792 Ahy13g1504 13 20980441 20983792 ECH
Ahy18g0835 18 9909319 9912799 Ahy13g1504 13 20980441 20983792 PCT
Ahy8g1599 8 33098956 33102442 Ahy13g1504 13 20980441 20983792 PCT
Ahy13g1504 13 20980441 20983792 Ahy18g0835 18 9909319 9912799 PCT
Ahy13g1504 13 20980441 20983792 Ahy8g1599 8 33098956 33102442 PCT