Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0612 ATGGAGGTTCGAAGTGTGCTCCAATTTCTTCAGGACAAGACCATTTTGGTTGTTGGAGCCACAGGATTTCTAGCCAAAATTTTTTTGGAGAAGGTGTTGAGGGTTCAACCAAATATTAAGAAGGTTTTTCTTCTCTTAAGAGCCGCAGATGCCAAATCTGCCACTCATCGCTTGAACAATGAGATCTTAGGGACAGACTTATTTAATTTGCTAAAAGAAAAGCTAGGAACAAATTTTAAGTCCTTTATATCTGAAAAGTTGACTGTGTTTCCTGGGGACATTTGTTATGAGGACTTGGGTTTGAAGGATTCAATCCTAAGGGAAGAGATTTGCAACCAAGTTGATGTTATTGTTAATTTGGCTGCAACCACTAATTTTGATGAAAGATATGACATAGCGTTGGATCTAAATGTCTTTGGAGCTAAGCATGTTATTAACTTCGCCAAACAATGTATTAAGCTAAAAGTACTAGTCCACGTGTCAACAGCTTATGTGTGTGGTGAGAGAGGTGGGCTCATATTAGAGAACCCATATCACTTCAAAGATGTACCTGGATTAGACATCGATGCTGAAAAGAAAATTGTGCGTGACAAGTTAGATGACCTACAAAAACAAGGAGCAACTCATAATGAAATCAAAATCGCCATGAAAGACTTAGGTATTACCAGGGCAAAGGTGTACGGTTGGCCAAATACATACGTATTTACAAAAGCAATAGCAGAGATGCTTGTGGAACAAATGAAAGAAACTATGTCTGTTGTTATTTTGCGTCCTGCCATTGTTACAAGTACATTCAAAGAACCTTTTTCTGGTTGGGTGGAAGGTGTAAGAACAATAGATAGTTTAGGTGTTGCTTATGGGAAAGGAAAACTAACATGCTTCCTTGGAAACATCAATGGAGTTGTGGATGTGATACCAGGAGACATGGTGGTGAATGCAATACTAGTGGCCATGGTGGCCCATGCACATCATCCAAGTGATGCTATATATCATGTGGCTTCCTCTGTTAGAAACCCTGTTAGATACACTAATCTCCAAGACTATGGATTAAGGTATTTCACTGCAAAACCTTGGATAAACAAAGATGGAACACCTGTTAAGGTTGGCAAAGTTACTGTCTTCACCAACATGGCTAGCTTCCGCAGATATATGTTCATTCACTACCTCTTTTGGTTAAAGGGACTTGAACTGGCCAATTCAGCATTTTGCAAGTACTTTCAGGGAACATATCAAGAGCTGAATAGGAAGATCCAAATTGTGATGCGGTTGGTGGAGCTTTATAGGCCTTATTTGTTCTTCAATGGCATATTTGATGATATGAACACAGAGAAGCTGCGAGTGGCAGCAATAGAAGGAGGGGTAGAGACAGATTTGTTTTACTTCGATCCTAAAGTGATCAATTGGGATGATTACTTTATGAACACTCATCTCCCAGGCATCGTCAAGTACATTTTCAAGTGA 1461 0.3943 MEVRSVLQFLQDKTILVVGATGFLAKIFLEKVLRVQPNIKKVFLLLRAADAKSATHRLNNEILGTDLFNLLKEKLGTNFKSFISEKLTVFPGDICYEDLGLKDSILREEICNQVDVIVNLAATTNFDERYDIALDLNVFGAKHVINFAKQCIKLKVLVHVSTAYVCGERGGLILENPYHFKDVPGLDIDAEKKIVRDKLDDLQKQGATHNEIKIAMKDLGITRAKVYGWPNTYVFTKAIAEMLVEQMKETMSVVILRPAIVTSTFKEPFSGWVEGVRTIDSLGVAYGKGKLTCFLGNINGVVDVIPGDMVVNAILVAMVAHAHHPSDAIYHVASSVRNPVRYTNLQDYGLRYFTAKPWINKDGTPVKVGKVTVFTNMASFRRYMFIHYLFWLKGLELANSAFCKYFQGTYQELNRKIQIVMRLVELYRPYLFFNGIFDDMNTEKLRVAAIEGGVETDLFYFDPKVINWDDYFMNTHLPGIVKYIFK* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0612 486 CDD FAR_C 413 485 IPR033640 -
Ahy18g0612 486 Pfam Male sterility protein 18 314 IPR013120 -
Ahy18g0612 486 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 485 IPR026055 GO:0080019
Ahy18g0612 486 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 334 IPR036291 -
Ahy18g0612 486 PANTHER FATTY ACYL-COA REDUCTASE 2 485 - -
Ahy18g0612 486 Pfam Male sterility protein 394 486 IPR033640 -
Ahy18g0612 486 CDD FAR-N_SDR_e 13 357 - -
Ahy18g0612 486 Gene3D - 7 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0612 Ahy-Chr18 6181632 6187917 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0612 110 485 Acyl Lipid Metabolism Gene Families AT4G33790 59.211 2.13e-171 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0612 K13356 - gmx:100788680 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0612 18 6181632 6187917 Ahy18g0612 18 6181632 6187917 ECH
Ahy18g0612 18 6181632 6187917 Ahy8g1414 8 30391429 30399596 hybridization
Ahy18g0612 18 6181632 6187917 Ahy13g0228 13 2346578 2350188 PCT
Ahy13g0228 13 2346578 2350188 Ahy18g0612 18 6181632 6187917 PCT