Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0228 ATGGAGTTGGGAAGCATACTCCACTTCCTTCAGGATAAGACCATTCTCATCACTGGAGCCACTGGTTTCCTTGCCAAAATTCTGGTGGAGAAGATACTGAGGGTTCAACCAAATGTTAAGAAACTATTTCTTCTTTTAAGAGCTGCTGATGCTAAGTCTGCTACTCATCGCTTGCAAAATGAGATCATAGGCAAGGACTTGTTTAGATTGCTAAAAGAAAACTTAGGTCCAAACTTCAATTCCTTCATAGCACAAAAGTTGACACTCGTTCCAGGGGATATTTCTCGCCAGGATTTGGGTTTGGACTCTGATTCTATTCTCAAGCAACAAATTTACGACCAAACACATGTTATTATTAATTTAGCTGCAAATACCAACTTTGATGAAAGGTATGATATATCGTTGGGCCTAAATACCTTTGGAGTTAAGCACGTCATAAATTTTTCCAAAAAATGCACTAAACTCAAAGTGCTTGTGCATGTATCAACAGCTTATGTGTGTGGAGAGGGAGAAGGTCTAATAATGGAGAAGCCATATGAGATGGGTGTTTCACTAAATGGAGTTGTTGGATTAGACATCGATGCCGAACACAAACTCATACGTCACAAATTAGCTGACCTTCAACATCAGGGAGCCACAGAGAACGAAATTAAAATTGCCATGAAGGACTTGGGTATTACCAGGGCAAAGAAGTATGGATGGCCAAACACATATGTAATGACAAAAGCAATGGGAGAGATGATAGTAGAGGAGGAGAAAGTCAAAGGAGACTTGGGTGTTGATATTGTGATTGTTCGTCCTTCCATTGTTACCAGCACCTTCAAGGACCCTTTCCCCGGTTGGGCCGAGGGTGTTAGAACCATTGACAGTCTTGCTGTTGCTTATGGTAAAGGAAAACTCACTTGCTTCCTTGGAGATCTCAACGCCATTGTTGATGTCATACCAGCAGATATGGTGGTCAATGCAATACTAGTGGCCACGGCAGCTCATGCAACTCATCGTGCTAATGGTAATGGCATATATCATGTTACTTCCTCTGTTAGAAACCCACTTCGAAACTGGAATCTGCAAGACGTGGGGTACAGGTATTTCACGGCCAAACCATGGATCAACAAGGATGGTAAGGCAGTGAAGGTTGGCAAATGCAAAATTCTGAGCAGCATGGACAGCTTCAACAGACACATGTTCCTCCGCTACTTTCTTCTCTTAAAGGGACTGCAGCTGGCCAACACTGCCTTTTGCCACTTCTTCCAGGGAACCTATCTTGATCTCAACAGGAAGATTCAGATCGTCCTGCGCTTGGTTGACCTGTACAAGCCTTACTTGTTCTTCAAGGGAGTTTTTGATGATCTCAACACACACAACTTGAGACAAGCTGTCCTCATAGACACTCATCTCTTTTACTTCGATCCCAAGCTCATCAATTGGGATGATTACTTCCTCAACACTCATCTCCCTGGTGTCGTCAAATATATCTTCAATAATAAGAATTATTAA 1497 0.4228 MELGSILHFLQDKTILITGATGFLAKILVEKILRVQPNVKKLFLLLRAADAKSATHRLQNEIIGKDLFRLLKENLGPNFNSFIAQKLTLVPGDISRQDLGLDSDSILKQQIYDQTHVIINLAANTNFDERYDISLGLNTFGVKHVINFSKKCTKLKVLVHVSTAYVCGEGEGLIMEKPYEMGVSLNGVVGLDIDAEHKLIRHKLADLQHQGATENEIKIAMKDLGITRAKKYGWPNTYVMTKAMGEMIVEEEKVKGDLGVDIVIVRPSIVTSTFKDPFPGWAEGVRTIDSLAVAYGKGKLTCFLGDLNAIVDVIPADMVVNAILVATAAHATHRANGNGIYHVTSSVRNPLRNWNLQDVGYRYFTAKPWINKDGKAVKVGKCKILSSMDSFNRHMFLRYFLLLKGLQLANTAFCHFFQGTYLDLNRKIQIVLRLVDLYKPYLFFKGVFDDLNTHNLRQAVLIDTHLFYFDPKLINWDDYFLNTHLPGVVKYIFNNKNY* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0228 498 PANTHER FATTY ACYL-COA REDUCTASE 2 493 - -
Ahy13g0228 498 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 493 IPR026055 GO:0080019
Ahy13g0228 498 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 346 IPR036291 -
Ahy13g0228 498 Pfam Male sterility protein 399 494 IPR033640 -
Ahy13g0228 498 CDD FAR_C 397 493 IPR033640 -
Ahy13g0228 498 Gene3D - 8 394 - -
Ahy13g0228 498 CDD FAR-N_SDR_e 13 368 - -
Ahy13g0228 498 Pfam Male sterility protein 17 323 IPR013120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0228 Ahy-Chr13 2346578 2350188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0228 114 493 Acyl Lipid Metabolism Gene Families AT4G33790 58.747 2.39e-169 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0228 K13356 - gmx:100798338 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0612 18 6181632 6187917 Ahy13g0228 13 2346578 2350188 PCT
Ahy8g1414 8 30391429 30399596 Ahy13g0228 13 2346578 2350188 PCT
Ahy13g0228 13 2346578 2350188 Ahy18g0612 18 6181632 6187917 PCT
Ahy13g0228 13 2346578 2350188 Ahy8g1414 8 30391429 30399596 PCT