Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0584 ATGACCACCCTAACGCAGCCACCTTCCAATGCTCTCAGTCTCAGTTACCTCCTAAAACAGCATTCCAAACGGCCCGGCCCGAACCGATTAACTGTTAAATGCGTTTACGCCTTCGAACCCACCAGCTTCGGAATCGGCTCCAACCGAGTGGACTGGCAGAGCTCCTGCGCCATTTTATCCAGCAAAGTCTTTTCGGAGGAAAAATCTTCTGCTTCCTCTAATTCCACCGGAAACAACAACTCTGCCGCTGATAACATCGCCGCTGTTAACGGCCACAAAACCGCTGTTACGGACCTTAATCTCGTCCCAATTAACGGCAGTGCAGACAGCGCCAAGCCGCTCCCTCCCAAGCCGCTAACGATTTCTGACCTCTCGCCGGCTCCAATGCACGGTTCGCAGCTTCGCGTTGCGTACCAAGGCGTTCCCGGCGCATACTCCGAGGCCGCCGCCGGAAAAGCTTACCCTAACTGTGAGGCCATACCGTGCGACCAGTTTGAGGTGGCGTTCCAGGCAGTGGAGCTCTGGATTGCCGACCGCGCCGTACTCCCGGTTGAAAACTCCCTTGGCGGATCGATCCACCGGAACTACGATCTCCTCCTCCGCCACCGCCTCCACATCGTTGGCGAGGTACAGCTCCCTGTCCACCACTGCCTCCTCGCTCTCCCCGGCGTACGAAAGGAGTACCTCAGCCGCGTAATCTCGCACCCTCAAGCTCTAGCTCAGTGTGAGCACACTCTCACAAAGCTCGGCCTCAACGTGGCTCGCGAGGCCGTCGACGACACCGCCGGCGCCGCAGAGTTCGTGGCAGTCAACTGCCTCCGCGACACGGCTGCAATCGCGAGCGCTCGCGCGGCAGAGCTGTATGGACTCCAGGTTTTAGCGGATGGGATCCAAGACGACCCGAGCAACGTAACCCGATTCGTGATGCTGGCACGAGAACCGATAATTCCCCGTACAGATAGGCCGTTCAAAACGAGCATTGTTTTTGCGCACGATAAGGGCACTTCGGTACTTTTCAAGGTGCTATCGGCGTTCGCCTTCAGGAACATAAGCTTGACGAAGATTGAGTCGCGGCCGCACAGGAACCGTCCGATCAGACTCGTGGATGATGCGAACGTTGGAACGGCCAAACACTTTGAGTATCTATTCTACGTTGATTTTGAGGCGTCCATGGCAGACGTTAGGGCGCAGAACGCCTTGGCAGAGGTGCAGGAATTCACCTCTTTCTTGAGGGTCTTGGGTAGTTATCCCATGGACATGACCCCTTGGACACCCTCTTCCAGAGGAAATTAG 1293 0.5669 MTTLTQPPSNALSLSYLLKQHSKRPGPNRLTVKCVYAFEPTSFGIGSNRVDWQSSCAILSSKVFSEEKSSASSNSTGNNNSAADNIAAVNGHKTAVTDLNLVPINGSADSAKPLPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNCEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLSRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVAVNCLRDTAAIASARAAELYGLQVLADGIQDDPSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYLFYVDFEASMADVRAQNALAEVQEFTSFLRVLGSYPMDMTPWTPSSRGN* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0584 430 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 18 427 - -
Ahy18g0584 430 Gene3D - 130 218 - -
Ahy18g0584 430 SUPERFAMILY ACT-like 307 419 IPR045865 -
Ahy18g0584 430 Pfam Prephenate dehydratase 136 314 IPR001086 GO:0004664|GO:0009094
Ahy18g0584 430 CDD ACT_CM-PDT 324 417 - -
Ahy18g0584 430 Gene3D - 319 420 - -
Ahy18g0584 430 ProSiteProfiles ACT domain profile. 326 417 IPR002912 -
Ahy18g0584 430 PANTHER AROGENATE DEHYDRATASE 18 427 - -
Ahy18g0584 430 Gene3D - 219 300 - -
Ahy18g0584 430 CDD PBP2_Ct-PDT_like 135 314 - -
Ahy18g0584 430 ProSitePatterns Prephenate dehydratase signature 1. 288 310 IPR018528 GO:0004664|GO:0009094
Ahy18g0584 430 ProSitePatterns Prephenate dehydratase signature 2. 352 359 IPR018528 GO:0004664|GO:0009094
Ahy18g0584 430 ProSiteProfiles Prephenate dehydratase domain profile. 135 312 IPR001086 GO:0004664|GO:0009094
Ahy18g0584 430 SUPERFAMILY Periplasmic binding protein-like II 135 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0584 Ahy-Chr18 5778454 5780218 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0584 K05359 - gmx:100797636 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0584 18 5778454 5780218 Ahy18g0584 18 5778454 5780218 ECH
Ahy18g0584 18 5778454 5780218 Ahy8g1392 8 30081783 30083428 hybridization
Ahy18g0584 18 5778454 5780218 Ahy13g0244 13 2485721 2487446 PCT
Ahy13g0244 13 2485721 2487446 Ahy18g0584 18 5778454 5780218 PCT