Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0244 ATGCACACTCTCTCACCGCCGTATTCTAACGCACTCAGCTACCTCCACCGGGGGAGTGAGCCCACATTTCGGGTAGTTCCAACCCGAATAACGGTTAAATGCGGTTACGGGTTCGAACCAGCAAGCTTCTCGCAGGGAGTCGGGTCGACCCGAACGGACTGGCAGAGCGCATGCGCCATCCTATCCAGCAAGGTCGACTCTCAGAACGAGGACTCAAACCCCACAGCGGCAGGAGAGAACATAGCCGCCGTGAACGGCCACAAATCCGCCGGAACAGACCTGAACCTAGTCCACGTCAGCGGCGAAAAAACGCTTCCTCCAAAGCCGCTCACGATCTCCGACCTATCGCCAGCACCGATGCACGGCTCGCAGCTGCGCGTGGCATACCAGGGAGTCCCCGGTGCGTACTCCGAGGCTGCCGCTGGCAAAGCCTACCCTAACGGAGAAGCCATACCTTGCGATCAGTTCGAGGTTGCTTTCCAAGCCGTTGAGCTCTGGATCGCCGATCGCGCCGTTTTACCCGTCGAAAACTCCCTCGGCGGCTCGATCCACCGGAACTACGACCTCCTCCTCCGCCATCGCCTCCACATCGTGGGCGAGGTCCAGCTCCCCGTTCACCACTGCCTCCTTGCCCTTCCTGGCGTCCGATCGGAGTACCTGACGCGCGTGATCTCTCACCCTCAGGCCCTCGCACAGTGCGAGCATACTCTCACCAAGCTCGGCCTCAACGTGGCTCGCGAAGCCGTAGACGACACCGCCGGCGCCGCGGAGTTCGTGGCCACCAACAACCTCCGAGACACGGCGGCAATCGCTAGCGCACGCGCGGCAGAGCTGTACGGTCTTCAGATCCTGGCGGATGGGATCCAAGATGACCCGAATAACGTGACCCGGTTCGTGATGTTGGCCCGAGAACCAATCATTCCTCGCACGGACCGGCCTTTTAAGACGAGTATCGTGTTCGCGCACGATAAAGGGACCTCCGTGCTCTTTAAGGTGCTCTCGGCGTTTGCGTTTAGGAACATCAGTTTGACTAAGATCGAGTCAAGGCCGCATCGTAACCGTCCGATCCGGATTGTTGACGATGACAAGAATGAAGGGACAGCAAAGCACTTTGAGTACATGTTTTATGTTGATTTCGAGGCATCCATGGCTGAGGTCAGAGCACAGAATGCCCTGGCTGAGGTTCAAGAATTCACCTCCTTTCTGAGGGTTTTGGGTAGTTATCCCATGGATATGACACCGTGGAGCCCTTCTGCTTCTCCTTCCTCTAGGGAGAGTAGAATTTAG 1287 0.5796 MHTLSPPYSNALSYLHRGSEPTFRVVPTRITVKCGYGFEPASFSQGVGSTRTDWQSACAILSSKVDSQNEDSNPTAAGENIAAVNGHKSAGTDLNLVHVSGEKTLPPKPLTISDLSPAPMHGSQLRVAYQGVPGAYSEAAAGKAYPNGEAIPCDQFEVAFQAVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRSEYLTRVISHPQALAQCEHTLTKLGLNVAREAVDDTAGAAEFVATNNLRDTAAIASARAAELYGLQILADGIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRIVDDDKNEGTAKHFEYMFYVDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSASPSSRESRI* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0244 428 ProSitePatterns Prephenate dehydratase signature 2. 343 350 IPR018528 GO:0004664|GO:0009094
Ahy13g0244 428 SUPERFAMILY Periplasmic binding protein-like II 126 309 - -
Ahy13g0244 428 Gene3D - 310 412 - -
Ahy13g0244 428 PANTHER AROGENATE DEHYDRATASE 24 419 - -
Ahy13g0244 428 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 24 419 - -
Ahy13g0244 428 CDD PBP2_Ct-PDT_like 126 305 - -
Ahy13g0244 428 ProSiteProfiles Prephenate dehydratase domain profile. 126 303 IPR001086 GO:0004664|GO:0009094
Ahy13g0244 428 Gene3D - 121 209 - -
Ahy13g0244 428 CDD ACT_CM-PDT 315 409 - -
Ahy13g0244 428 Gene3D - 210 291 - -
Ahy13g0244 428 ProSiteProfiles ACT domain profile. 317 409 IPR002912 -
Ahy13g0244 428 Pfam Prephenate dehydratase 127 305 IPR001086 GO:0004664|GO:0009094
Ahy13g0244 428 ProSitePatterns Prephenate dehydratase signature 1. 279 301 IPR018528 GO:0004664|GO:0009094
Ahy13g0244 428 SUPERFAMILY ACT-like 298 411 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0244 Ahy-Chr13 2485721 2487446 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0244 K05359 - gmx:100809331 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0244 13 2485721 2487446 Ahy13g0244 13 2485721 2487446 ECH
Ahy18g0584 18 5778454 5780218 Ahy13g0244 13 2485721 2487446 PCT
Ahy8g1392 8 30081783 30083428 Ahy13g0244 13 2485721 2487446 PCT
Ahy13g0244 13 2485721 2487446 Ahy18g0584 18 5778454 5780218 PCT
Ahy13g0244 13 2485721 2487446 Ahy8g1392 8 30081783 30083428 PCT