Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0561 ATGGAGAATCATCATTCAAGATATTACTTGACTTTCTTATTGCCTGTTCTAGCACTAGTAGTAGTAGTGCTGAATGTCTCTAATGCACAGCCTCTAGTTCCAGCATTGTTCATATTTGGTGACTCAGTGGTTGATGTTGGAAACAACAACCAACTACACACCATTGTCAAAGCAAACTTCCCACCTTATGGAAGAGACTTCAAGAATCACAGGTCAACTGGCAGGTTTTGCAATGGAAAACTTGCCTCAGATTTCACTGCTGAAAACCTTGGATTTACATCTTATCCACCACCTTACCTCAACTTAAGGGTCAAAGGAAATAACCTCTTGAATGGTGCTAACTTTGCCTCAGCTGCTTCTGGTTACTATGACTTCACAGCCAAATTATGGGATGCAATTCCATTGAGCCAGCAATTGGAACACTACAAAGAATGTCAGAATATATTGGTGGAAGTAGCAGGACAGTCAAATGCTTCATCAATCATATCTGGTGCTATACATCTTGTTAGTGCTGGCAACAGTGACTTCATTCAGAATTATTACATAAACCCTCTGCTTAACAAGGTTTACACTGCTGATCAGTTCTCTGACATTCTCATCCAACACTATGCCAATTTCATTCAGAATTTATATGCACTTGGAGCAAGGAGGATAGGTGTGACAACACTGCCTCCAATGGGTTGCGTGCCGGCCGCCATCACTCTATTTGGCTCCGATAGCAATGTATGTGTGGCGAGGCTAAACACCGATGCTCTTAACTTCAACATGAAGCTAAATTCCACATCCGAGAGCTTGCTGAGAAACCTTCCTGGCCTCAAATTGGTCATCCTTGATATCTACCAACCTCTCTATGAACTTGTCACTAAACCTTCCGAAAATGGTTTTTTTGAAGCAAGGAAGGCTTGTTGTGGAACAGGGTTGGTAGAGACAGCTATATTGTGCAACAAGGACTCCATAGGAACATGTGCCAATGCATCCGAGTATGTATTCTGGGATGGTTTTCATCCATCGGAGTCTGCAAACAAGGTTTTAGCTGATGATTTGATTGCTGCTGGGATCTCTCTCATATCCTAA 1074 0.4218 MENHHSRYYLTFLLPVLALVVVVLNVSNAQPLVPALFIFGDSVVDVGNNNQLHTIVKANFPPYGRDFKNHRSTGRFCNGKLASDFTAENLGFTSYPPPYLNLRVKGNNLLNGANFASAASGYYDFTAKLWDAIPLSQQLEHYKECQNILVEVAGQSNASSIISGAIHLVSAGNSDFIQNYYINPLLNKVYTADQFSDILIQHYANFIQNLYALGARRIGVTTLPPMGCVPAAITLFGSDSNVCVARLNTDALNFNMKLNSTSESLLRNLPGLKLVILDIYQPLYELVTKPSENGFFEARKACCGTGLVETAILCNKDSIGTCANASEYVFWDGFHPSESANKVLADDLIAAGISLIS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0561 357 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Ahy18g0561 357 Gene3D SGNH hydrolase 24 353 IPR036514 -
Ahy18g0561 357 SUPERFAMILY SGNH hydrolase 193 350 - -
Ahy18g0561 357 PANTHER GDSL ESTERASE/LIPASE EXL3 16 356 - -
Ahy18g0561 357 CDD SGNH_plant_lipase_like 34 349 IPR035669 -
Ahy18g0561 357 PANTHER GDSL-MOTIF LIPASE 16 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0561 Ahy-Chr18 5465747 5467986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0561 12 348 Acyl Lipid Metabolism Gene Families AT4G10950 32.059 1.51e-61 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0561 - - gmx:100804640 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0561 18 5465747 5467986 Ahy18g0561 18 5465747 5467986 ECH
Ahy18g0561 18 5465747 5467986 Ahy8g1364 8 29771029 29773132 hybridization
Ahy18g0561 18 5465747 5467986 Ahy13g0258 13 2660689 2663545 PCT
Ahy13g0258 13 2660689 2663545 Ahy18g0561 18 5465747 5467986 PCT