Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0258 ATGGGGTATTCAAGGAGTTCTATATTTCGTTCCTTTGTTGTTGTAGTTGTTGTTTTTGTTGTTTTGGTGGTGAATGTGGGGAATGGACAACTAGTTCCTGCATTGTTCATATTTGGGGACTCAGTTGTTGATGTTGGCAACAATAACCACCGATTAACTCTTGTTAAAGCAAACTTCCCTCCTTATGGAAGAGACTTCCAAAATCACTATCCAACGGGAAGGTTCTGCAATGGAAAGCTGGCCACAGATTTCATTGTTGAGATTCTTGGATTTACCTCTTATCCACCAGCTTACATGGACTTAAAGCCTAGAGGAAAAAACCTCTTGAATGGAACTAACTTTGCCTCAGCTGCTTCTGGTTACTTAGATGCTACAGCCACACTATATAATGCTGTTCCATTGAGCCATCAGCTGGAATATTACAAGGATTGTCAGAACAAATTGGTGGAAACAGCAGGGCAATCAAAGGCTGCATCAATTATATCTGATGCTATATATATTGTTACCGCAGGCAGCAGTGACTTTATTCAAAACTTTTACATAAATCCTTTGCTAAACAAGGTTTATACAGCTGATAAATTCTCGGATCTTCTCTTGCAACGCTACTCCAATTTCATTCAGAATTTGCATGCACTAGGAGCAAGGAGAATAGGTGTAACAACATTGCCTCCAATGGGTTGTTTGCCAGCATGCATAACTCTGTTTAATCCTCACAGCAACGAATGCGTGTCGAATTTCAACAATGATGCTATCAACTTCAATGCAAAGCTGAATGCAACTTCTCAGAAGTTGAGACAAATGCTTCCTGGACTCAACTTGGTCGTCCTTGATATCTATCAGCCTCTCTATGACCTTGTCACTAAGCCCCAAGACTATGGATTTTCTGAAGCAAGGAAAGGTTGTTGTGGAACGGGGCTGGTAGAAACAGCAATATTGTGCAACAAGAAGTCCATAGGAACATGTGCTAATGCAACTGAGTATGTATTCTGGGATGGTCTTCATCCCTCAGAGGCTGCAAACCAAGTTTTGGCCAATGATTTGTTAGCTGCTGGCATTTCTCTCATATCCTAA 1071 0.4099 MGYSRSSIFRSFVVVVVVFVVLVVNVGNGQLVPALFIFGDSVVDVGNNNHRLTLVKANFPPYGRDFQNHYPTGRFCNGKLATDFIVEILGFTSYPPAYMDLKPRGKNLLNGTNFASAASGYLDATATLYNAVPLSHQLEYYKDCQNKLVETAGQSKAASIISDAIYIVTAGSSDFIQNFYINPLLNKVYTADKFSDLLLQRYSNFIQNLHALGARRIGVTTLPPMGCLPACITLFNPHSNECVSNFNNDAINFNAKLNATSQKLRQMLPGLNLVVLDIYQPLYDLVTKPQDYGFSEARKGCCGTGLVETAILCNKKSIGTCANATEYVFWDGLHPSEAANQVLANDLLAAGISLIS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0258 356 Pfam GDSL-like Lipase/Acylhydrolase 35 346 IPR001087 GO:0016788
Ahy13g0258 356 Gene3D SGNH hydrolase 26 352 IPR036514 -
Ahy13g0258 356 CDD SGNH_plant_lipase_like 33 348 IPR035669 -
Ahy13g0258 356 PANTHER GDSL-MOTIF LIPASE 14 355 - -
Ahy13g0258 356 SUPERFAMILY SGNH hydrolase 148 348 - -
Ahy13g0258 356 PANTHER GDSL ESTERASE/LIPASE EXL3 14 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0258 Ahy-Chr13 2660689 2663545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0258 31 347 Acyl Lipid Metabolism Gene Families AT4G10950 32.812 2.80e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0258 - - gmx:100775618 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0258 13 2660689 2663545 Ahy13g0258 13 2660689 2663545 ECH
Ahy18g0561 18 5465747 5467986 Ahy13g0258 13 2660689 2663545 PCT
Ahy8g1364 8 29771029 29773132 Ahy13g0258 13 2660689 2663545 PCT
Ahy13g0258 13 2660689 2663545 Ahy18g0561 18 5465747 5467986 PCT
Ahy13g0258 13 2660689 2663545 Ahy8g1364 8 29771029 29773132 PCT