Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0498 ATGGAGAGACAAGGAACAGAAGATATGAAGAAGAAGCAATCAAAATTCAAGAGGATTTGTGTGTTTTGTGGTAGCAGCCCTGGTAACAAAGCTAGTTACAAGGATGCTGCCATTGAACTTGGAAGAGAATTGGTGTCAAGAAATATTGATCTGGTTTATGGAGGAGGCAGCATTGGTTTGATGGGATTGATTTCTCAGGCTGTTTATGATGGTGGTCGCCATGTAATTGGAGTTATTCCCAAGACACTTATGCCAAGAGAGCTTACTGGAGAAACAGTGGGGGAAGTGAAGGCAGTTGCAGACATGCATCAAAGGAAAGCAGAGATGGCTAAGCATTCTGATGCCTTTATTGCATTACCTGGTGGCTATGGCACACTTGAGGAGCTTCTTGAGGTCATAACCTGGGCTCAACTTGGCATCCATGATAAACCGGTGGGGTTGCTGAATGTTGATGGATACTACAATTCATTCTTATCATTCATTGACAAAGCTGTGGAGGAAGGGTTCATCAGCCCCAAAGCTCGCCATATAATTGTGTCTGCCCCAACACCAAAAGACCTTGTCAAAAACATGGAGGAATATTTCCCACAACATGAAAGAGTTGCCTCTAAGCTAAGCTGGGAAAGTGGGATCTGA 636 0.4387 MERQGTEDMKKKQSKFKRICVFCGSSPGNKASYKDAAIELGRELVSRNIDLVYGGGSIGLMGLISQAVYDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSFLSFIDKAVEEGFISPKARHIIVSAPTPKDLVKNMEEYFPQHERVASKLSWESGI* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0498 211 PANTHER LOG FAMILY PROTEIN YJL055W 8 209 - -
Ahy18g0498 211 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 8 209 - -
Ahy18g0498 211 Gene3D - 5 193 - -
Ahy18g0498 211 Pfam Possible lysine decarboxylase 61 191 IPR031100 -
Ahy18g0498 211 TIGRFAM TIGR00730: TIGR00730 family protein 17 194 IPR005269 GO:0009691|GO:0016787
Ahy18g0498 211 SUPERFAMILY MCP/YpsA-like 15 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0498 Ahy-Chr18 4559562 4566483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0498 K22522 - gmx:100811156 377.481
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0498 18 4559562 4566483 Ahy18g0498 18 4559562 4566483 ECH
Ahy18g0498 18 4559562 4566483 Ahy13g0324 13 3292175 3298509 ECH
Ahy18g0498 18 4559562 4566483 Ahy8g1306 8 28875212 28881668 hybridization
Ahy18g0498 18 4559562 4566483 Ahy13g0324 13 3292175 3298509 PCT
Ahy13g0324 13 3292175 3298509 Ahy18g0498 18 4559562 4566483 PCT