Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0324 ATGATGAAGAGAGAAGAAAAAGAAGAACAAGAACAACAACTAGAAGAAGAAGAAGAAGAAGAAGAAGAATCAAGGTTCAAGAGGGTATGTGTGTTTTGTGGTAGTAGCCCTGGGAACAAGAGTAGCTATAAGGATGCTGCTATTGACCTTGGCAAAGAACTGGTGTCAAGAAATATTGATTTGGTTTATGGAGGAGGCAGCATTGGCTTGATGGGATTGGTTTCTCAGGCTGTTTATGATGGAGGTCGCCATGTTATTGGAGTTATTCCCAAGACACTCATGCCAAGAGAGATTACTGGAGAGACAGTGGGGGAAGTAAAAGCAGTGGCAGGCATGCATCAAAGAAAGGCAGAGATGGCTAAGCATTCTGATGCCTTCATTGCTTTACCAGGTGGCTATGGAACTCTTGAGGAGCTTCTTGAGGTCATAACCTGGGCTCAGCTTGGAATCCATGACAAACCAGTGGGGTTGCTGAATGTAGATGGATACTACAATTCGTTATTGTCTTTCATTGACAAAGCTGTGGAAGAAGGCTTCATTAGCCCCAAAGCTCGCCACATAATCGTATCTGCCCCTTCACCAAAAGAGCTTGTCAAAAAGATGGAGGAATATTCCCCACAACATGAAAGAGTTGCATCTAAGTTAAGCTGGGAAGCTGAGCAAGTAGGATCATACACCTCAAATTGTGACATCTCAAGGTGA 702 0.4359 MMKREEKEEQEQQLEEEEEEEEESRFKRVCVFCGSSPGNKSSYKDAAIDLGKELVSRNIDLVYGGGSIGLMGLVSQAVYDGGRHVIGVIPKTLMPREITGETVGEVKAVAGMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPKARHIIVSAPSPKELVKKMEEYSPQHERVASKLSWEAEQVGSYTSNCDISR* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0324 233 SUPERFAMILY MCP/YpsA-like 26 204 - -
Ahy13g0324 233 MobiDBLite consensus disorder prediction 1 25 - -
Ahy13g0324 233 TIGRFAM TIGR00730: TIGR00730 family protein 27 204 IPR005269 GO:0009691|GO:0016787
Ahy13g0324 233 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG1 17 233 - -
Ahy13g0324 233 Coils Coil 1 27 - -
Ahy13g0324 233 Gene3D - 15 203 - -
Ahy13g0324 233 Pfam Possible lysine decarboxylase 71 201 IPR031100 -
Ahy13g0324 233 PANTHER LOG FAMILY PROTEIN YJL055W 17 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0324 Ahy-Chr13 3292175 3298509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0324 K22522 - gmx:100819644 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0324 13 3292175 3298509 Ahy13g0324 13 3292175 3298509 ECH
Ahy18g0498 18 4559562 4566483 Ahy13g0324 13 3292175 3298509 ECH
Ahy18g0498 18 4559562 4566483 Ahy13g0324 13 3292175 3298509 PCT
Ahy8g1306 8 28875212 28881668 Ahy13g0324 13 3292175 3298509 PCT
Ahy13g0324 13 3292175 3298509 Ahy18g0498 18 4559562 4566483 PCT
Ahy13g0324 13 3292175 3298509 Ahy8g1306 8 28875212 28881668 PCT