Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0460 ATGAGGACCAGCAACCACTTGATTGGAGTACTGAACTTCTTAACGTTCCTGGTCTCAGTTCCGATCCTAGGCGGCGGAATATGGCTGAGCAGCAGGGCCAACAACACCGACTGCATGAGGTTCCTGCAGTGGCCATTGATCATCATCGGGATCACCATCATGGTGGTGTCCTTGGCGGGTTTCGCCGGCGCGTGTTACCGCAACACCTTCCTAATGAGACTCTACCTGGTGGTCATGTTCATCGTCATCGCGGTCCTCATAGGCTTCATAGTGTTTGCCTACGTAGTCACCGAAAAAGGGTCGGGCCAGGTGGTGCCGAACCGGGCCTACTTGGATTACTACCTGTCGGACTACTCGGGCTGGTTGGAGGAGCGGGTCGCCAGTGACTCATATTGGCCCAAGATAAGTTCTTGTATTAGGGATTCTAAGGTCTGTGCTAAGCTTTCTGCCGTTCCTGAAACTGCTGATATGTTCTACCAAAGAAAACTTTCTCCCATTCAGTCTGGTTGTTGCAAGCCGCCAACAGAGTGTGGGTATGTGTACCAGAACGAGACAGTGTGGAACCAAGGCGGAGGCCTGGTTGGAACTGACCCTGATTGCAGCCGGTGGAGCAATGACCAGCAGATGCTCTGCTACTCGTGCGACTCTTGCAAGGCCGGCGTCCTCGCCAGCCTCAAGAAGAGCTGGAGGAAGGTCTCTGTCATCAACATTGTTGTCATGATCATCCTTGTCATCCTCTATGTCGTCGCTTACGCCGCCTACCGCAACAACCGCCGGATGGACAATGATGAGCCCTACGGTCAAGCAAGGATGACAAAGACACAACCTAGCGCCTTTCATCTCTAG 846 0.5331 MRTSNHLIGVLNFLTFLVSVPILGGGIWLSSRANNTDCMRFLQWPLIIIGITIMVVSLAGFAGACYRNTFLMRLYLVVMFIVIAVLIGFIVFAYVVTEKGSGQVVPNRAYLDYYLSDYSGWLEERVASDSYWPKISSCIRDSKVCAKLSAVPETADMFYQRKLSPIQSGCCKPPTECGYVYQNETVWNQGGGLVGTDPDCSRWSNDQQMLCYSCDSCKAGVLASLKKSWRKVSVINIVVMIILVILYVVAYAAYRNNRRMDNDEPYGQARMTKTQPSAFHL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0460 281 Pfam Tetraspanin family 6 249 IPR018499 GO:0016021
Ahy18g0460 281 PANTHER TETRASPANIN-3-LIKE 1 275 - -
Ahy18g0460 281 PANTHER TETRASPANIN-8-RELATED 1 275 IPR044991 GO:0009734|GO:0016021
Ahy18g0460 281 PRINTS Transmembrane four family signature 39 65 - -
Ahy18g0460 281 PRINTS Transmembrane four family signature 66 94 - -
Ahy18g0460 281 PRINTS Transmembrane four family signature 6 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0460 Ahy-Chr18 4060557 4062956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0460 1 273 Miscellaneous Gene Families AT5G60220 71.119 1.05e-127 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0460 - - gmx:100788977 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0460 18 4060557 4062956 Ahy18g0460 18 4060557 4062956 ECH
Ahy18g0460 18 4060557 4062956 Ahy8g1268 8 28245677 28247817 hybridization
Ahy18g0460 18 4060557 4062956 Ahy13g0382 13 3859647 3865878 PCT
Ahy13g0382 13 3859647 3865878 Ahy18g0460 18 4060557 4062956 PCT