Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0382 ATGAGAGCAAGCAACCACTTAATTGGAGCACTAAACTTCCTAACTTTCCTCCTCTCGATCCCAATCCTGGGCGGCGGAATATGGCTGAGCAGCCGCGCCAGCACGACCGACTGCCTCCGGTTCCTGCAGTGGCCCCTAATCGTGATCGGAATCAGCATCATGGTAGTTTCACTGGCGGGCTTCGCAGGCGCGTGTTACCGCAACACCTTCCTAATGCGTCTCTACCTGGTGGTAATGTTCGTCGTCATTGCGGTTCTCATCGGCTTCATCATCTTCGCGTATGTTGTAACTGACAAGGGATCGGGCCGGGCCCTCTTGAACCGGGCCTACTTGGACTACTACCTTCAGGACTACTCGGGCTGGCTGGAGGAGCGCGTGGCCAGCAACGCTTACTGGCCCAAGATAAGCGCGTGTGTTAGGGACTCTAAGGTTTGTGGTAGAATGGGAAGAAGCATTAATGGAGTTCCTGAGACTCCTCAAATGTTCTATCTTAGAACCCTCTCTCCCATTCAGTCTGGTTGTTGCAAGCCTCCAACAGAATGTGGCTATATCTACCAAAATGAAACGGTTTGGAACATCGGGTCTGGCGCAATGGCGGCCAACCCGGACTGCGCAAGGTGGAGCAATGACCAAGAGATGCTCTGTTATGCCTGCGACTCTTGCAAGGCCGGGGTGTTGGCAAGTCTCAAGAAGAGTTGGAGGAAGGTCTCCGTCATCAATATCATCGTCATGATCATCCTCGTAATTGTCTACATCATTGCATACACCGCGTTTCGGAACAATCGGAAGATGGACAACGACGAACCCTACGGAGAAGCCAGAATGACAAAGGCACAACCTAGTAGAATAAATATTTAG 858 0.5186 MRASNHLIGALNFLTFLLSIPILGGGIWLSSRASTTDCLRFLQWPLIVIGISIMVVSLAGFAGACYRNTFLMRLYLVVMFVVIAVLIGFIIFAYVVTDKGSGRALLNRAYLDYYLQDYSGWLEERVASNAYWPKISACVRDSKVCGRMGRSINGVPETPQMFYLRTLSPIQSGCCKPPTECGYIYQNETVWNIGSGAMAANPDCARWSNDQEMLCYACDSCKAGVLASLKKSWRKVSVINIIVMIILVIVYIIAYTAFRNNRKMDNDEPYGEARMTKAQPSRINI* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0382 285 PANTHER TETRASPANIN-8-RELATED 1 279 IPR044991 GO:0009734|GO:0016021
Ahy13g0382 285 PRINTS Transmembrane four family signature 6 29 - -
Ahy13g0382 285 PRINTS Transmembrane four family signature 39 65 - -
Ahy13g0382 285 PRINTS Transmembrane four family signature 66 94 - -
Ahy13g0382 285 Pfam Tetraspanin family 6 253 IPR018499 GO:0016021
Ahy13g0382 285 PANTHER TETRASPANIN-3-LIKE 1 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0382 Ahy-Chr13 3859647 3865878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0382 1 277 Miscellaneous Gene Families AT5G60220 71.480 9.31e-131 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0382 - - gmx:100788977 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0382 13 3859647 3865878 Ahy13g0382 13 3859647 3865878 ECH
Ahy18g0460 18 4060557 4062956 Ahy13g0382 13 3859647 3865878 PCT
Ahy8g1268 8 28245677 28247817 Ahy13g0382 13 3859647 3865878 PCT
Ahy13g0382 13 3859647 3865878 Ahy18g0460 18 4060557 4062956 PCT
Ahy13g0382 13 3859647 3865878 Ahy8g1268 8 28245677 28247817 PCT