Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0386 ATGAGTAACCTCCCGGTTACTGACCCGCCTGAGACCAAATCTACGGGCTTTTTCGCTTCCATGTCCTCCATGTTCGGCAGCGCCAGGCGGGAATCGAGTAGATCGCACTCACCGGAACGCCTCAATTTGGAAGGATTAGAAGTCATAAATCCCGAGGGAGGAAAAGATGATGCAGCAGAGGAAGCTAAAAAAGGAAGATTTAAACCGGAGGAAAGAGATAGTTTCTTCAAAATGATGAAAAATTACATTGGGGCAGATGTGACATCACTGGTAACGCTACCAGTTACTATCTTTGAACCTATGACTATGCTTCAGAAAATGGCCGAGTTGATGGAGTACTCCCACTTGCTTGATAAAGCAGATGAGTGTGAGGATCCATACATGCGGCTTGTGTATGCATCATCATGGGCTGTATCTGTGTACTATGCATACCAAAGAACATGGAAGCCTTTTAATCCAATCCTTGGAGAGACCTATGAAATGGTTAACCATGGTGGAATCACTTTTCTTTCAGAACAGGTTAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGAGCATTTCACATATGATATCACTTCGAAGTTGAAAACCAAATTCTTGGGAAATTCTCTGGATGTTTATCCTCTTGGAAGGACACGTGTAACTCTCAAGAGGGATGGTGTAATCTTAGATTTGGTGCCACCTCCTACAAAGGTTAATAACCTGATATTTGGACGGACATGGATTGAGTCACCTGGGGAAATGATAATGACAAATTTGACAACTGGGGAAAAAGTTGTACTTTACTTTCAACCATGTGGATGGTTTGGGGCTGGTCGCTATGAGGTAGATGGGTATGTTTATAATGCTGCAGAGGAGCCTGAAATTTTGATAACTGGGAAATGGAATGAGTCAATGCAATATCAACCTTGTGATTTGGAAGGAGAGCCTCGTCCAGGTACAGAATTGAAAGAGGTGTGGCATGTTGCTGATGTTCCAGAGGATGACAAATTTGATTATACATATTTTGCGCACAAATTAAACAGTTTCGACACAGCTCCAAGAAAACTCTTGCCATCGGACTCCCGTTTACGCCCAGATAGATATGCACTTGAGATGGGTAACATAACCAAATCTGGTGCTGAAAAGAGCAGGTTGGAGGAGAGGCAGCGTGCTGAAAAGAAAATAAGGGAGGCCAAAGGGGAAACCTTCAAAACAAAGTGGTTTGATATAACTGAAGAAGTGGCAACCACTCCTTGGGGTGACTTGGAAATCTGTAAATACAATGGTAAATACACTCAGCATAGGGCTGCTATAGATAGCTCAGCCACTGATGAGGTTGATAATAAATCCGTTGAATTCAACCCATGGCAGTATCCACCACCATCATAA 1380 0.4326 MSNLPVTDPPETKSTGFFASMSSMFGSARRESSRSHSPERLNLEGLEVINPEGGKDDAAEEAKKGRFKPEERDSFFKMMKNYIGADVTSLVTLPVTIFEPMTMLQKMAELMEYSHLLDKADECEDPYMRLVYASSWAVSVYYAYQRTWKPFNPILGETYEMVNHGGITFLSEQVSHHPPMSAGHAENEHFTYDITSKLKTKFLGNSLDVYPLGRTRVTLKRDGVILDLVPPPTKVNNLIFGRTWIESPGEMIMTNLTTGEKVVLYFQPCGWFGAGRYEVDGYVYNAAEEPEILITGKWNESMQYQPCDLEGEPRPGTELKEVWHVADVPEDDKFDYTYFAHKLNSFDTAPRKLLPSDSRLRPDRYALEMGNITKSGAEKSRLEERQRAEKKIREAKGETFKTKWFDITEEVATTPWGDLEICKYNGKYTQHRAAIDSSATDEVDNKSVEFNPWQYPPPS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0386 459 MobiDBLite consensus disorder prediction 50 66 - -
Ahy18g0386 459 Gene3D - 156 330 - -
Ahy18g0386 459 ProSitePatterns Oxysterol-binding protein family signature. 172 183 IPR018494 -
Ahy18g0386 459 MobiDBLite consensus disorder prediction 28 66 - -
Ahy18g0386 459 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 9 457 - -
Ahy18g0386 459 Pfam Oxysterol-binding protein 74 432 IPR000648 GO:0008289
Ahy18g0386 459 Coils Coil 378 398 - -
Ahy18g0386 459 MobiDBLite consensus disorder prediction 436 459 - -
Ahy18g0386 459 SUPERFAMILY Oxysterol-binding protein-like 69 442 IPR037239 -
Ahy18g0386 459 Gene3D - 364 452 - -
Ahy18g0386 459 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 9 457 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0386 Ahy-Chr18 3305574 3309589 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0386 - - gmx:100779808 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0386 18 3305574 3309589 Ahy18g0386 18 3305574 3309589 ECH
Ahy18g0386 18 3305574 3309589 Ahy8g1192 8 27310071 27314003 hybridization
Ahy18g0386 18 3305574 3309589 Ahy13g0466 13 4802077 4805757 PCT
Ahy13g0466 13 4802077 4805757 Ahy18g0386 18 3305574 3309589 PCT