Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0466 ATGGGTAGCCCGAAGAAGAACGAAAGCAAGGGCTTTTTTGCCTCCGTATCTTCTAGCTTCTCCGTTTTCAGCAACGCGATGCACCGATCCGTCAATGGACTTTTGGGATATGAAGGTGTAGAAGTCATAAATCCAGAGGGAGGTAAAGAAGATGCAGAGGAAGAAGCTCAGAGGGGAAGATGGAAGCAGGAGGATAGAGATAGTTATTGGAAGATGATGCAGAAATATATTGGCGCAGATGTAACATCAATGGTGACACTACCAGTTATTATCTTTGAGCCAATGACTATGCTTCAGAAAATGGCAGAGTTGATGGAGTACTCCTACTTGTTGGATCGGGCTGATGAATCAGAGGATCCATACATGCGGTTGGTATATGCATCATCATGGGCTATATCTGTGTACTTTGCATACCAGCGAACATGGAAGCCTTTCAATCCAATCCTTGGAGAGACTTATGAATTGGTTAACCATGGTGGAATTACATTTCTTGCAGAACAGGTGAGTCATCATCCCCCAATGAGTGCTGGGCATGCTGAGAATGACCATTTTGCATATGATGTGACTTCAAAGTTAAAAACAAAGTTTTTGGGAAATTCTGTTGATGTTTATCCTGTTGGAAGAACACGAGTGACCCTCAAGAGAGATGGTGTTGTCTTAGATTTGGTGCCTCCACCTACAAAGGTTAACAACTTGATATTTGGCCGGACTTGGGTTGATTCACCCGGGGAAATGATAATGACAAATTTAACAACGGGAGACAAAGCTGTACTGTACTTTCAACCCTGTGGTTGGTTTGGTGCTGGTCGCTATGAAATTGATGGATATATTTACAATTCTTCTGAGGAGCCTAAAATATTAATGACTGGGAAATGGAATGAATCACTGAGTTACCAACCTTGTGACCCAGAAGGAGAGCCTCTACCAAACACGGAAATGAAAGAGGTTTGGCATGTTGCTGATGTTCCACCAAATGATAAATTCCAGTACACACATTTTGCCCACAAAATAAACAGCTTTGACACCGCCCCCAAAAAGTTGCTGGCATCAGACTCTCGTTTACGCCCAGATAGATATGCACTTGAGTTGGGTGATCTGTCGAAAGCTGGAACAGAGAAAACCAGCTTGGAGGAGAGGCAGCGAGCTGAAAAGAGAACCCGAGAAGCAAACGGGCATAACTTCACACCAAGATGGTTTGATCTAACTGAAGAGGTGACAACAACTCCATGGGGAGAATTGGAAATCTACCAGTATAATGGTAAATATTCCGAACACCGGGCTTCTATCGATAACTCTGGCAGCATTGATAATGTTGATGTTAAATCAACTGAATTCAATCCATGGCAATATGGTAACTTGTCCACAGAGTGA 1371 0.4303 MGSPKKNESKGFFASVSSSFSVFSNAMHRSVNGLLGYEGVEVINPEGGKEDAEEEAQRGRWKQEDRDSYWKMMQKYIGADVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDRADESEDPYMRLVYASSWAISVYFAYQRTWKPFNPILGETYELVNHGGITFLAEQVSHHPPMSAGHAENDHFAYDVTSKLKTKFLGNSVDVYPVGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWVDSPGEMIMTNLTTGDKAVLYFQPCGWFGAGRYEIDGYIYNSSEEPKILMTGKWNESLSYQPCDPEGEPLPNTEMKEVWHVADVPPNDKFQYTHFAHKINSFDTAPKKLLASDSRLRPDRYALELGDLSKAGTEKTSLEERQRAEKRTREANGHNFTPRWFDLTEEVTTTPWGELEIYQYNGKYSEHRASIDNSGSIDNVDVKSTEFNPWQYGNLSTE* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0466 456 ProSitePatterns Oxysterol-binding protein family signature. 166 177 IPR018494 -
Ahy13g0466 456 Gene3D - 151 328 - -
Ahy13g0466 456 SUPERFAMILY Oxysterol-binding protein-like 63 438 IPR037239 -
Ahy13g0466 456 MobiDBLite consensus disorder prediction 371 390 - -
Ahy13g0466 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 3C-LIKE ISOFORM X1 1 453 - -
Ahy13g0466 456 Gene3D - 358 448 - -
Ahy13g0466 456 Pfam Oxysterol-binding protein 68 426 IPR000648 GO:0008289
Ahy13g0466 456 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 453 IPR000648 GO:0008289
Ahy13g0466 456 MobiDBLite consensus disorder prediction 370 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0466 Ahy-Chr13 4802077 4805757 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0466 - - gmx:100779808 859.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0466 13 4802077 4805757 Ahy13g0466 13 4802077 4805757 ECH
Ahy18g0386 18 3305574 3309589 Ahy13g0466 13 4802077 4805757 PCT
Ahy8g1192 8 27310071 27314003 Ahy13g0466 13 4802077 4805757 PCT
Ahy13g0466 13 4802077 4805757 Ahy18g0386 18 3305574 3309589 PCT
Ahy13g0466 13 4802077 4805757 Ahy8g1192 8 27310071 27314003 PCT