Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0331 ATGGGCGGCGTTTCTTGTACACGACAGACTACGCCAGCAGCTGCAGCATTAGCTGTAGTACTGCTCGTCATGTGCTCCACCGTCAGTTCGTGTCCGCCGTCGGACAGGGCGGCGCTGCTGGCTTTCAAGGCCGCTCTCCACGAGCCTCACCTTGGAATCTTTAACTCGTGGACCGGCGCCGACTGCTGTAACAAGTGGTACGGCGTCAGCTGCGACCAGGAGACCCGCCGCGTCGCCGACATCAACCTCCGCGGCGAGTCGGAGGAGCCGATATTCGAGAGAGCACACCGAACTGGCTACATGACCGGATACATCTCTCCGAAGATCTGCAAGCTCAAGCGTCTCTCCAGCATCACCATCGCCGACTGGAAGGGAATCTCCGGCGAGATTCCTCGCTGCATCACCTCTTTACCGTTCCTCCGCATCGTCGACCTAATCGGAAACCAAATCTCCGGCACAATCCCCTCCGACATTGGCAGACTCCACCGCCTCACCGTCCTCAACGTCGCCGACAACGCAATCTCCGGCTGGATCCCTCCGTCGCTAACGAACGTCACAAGCCTCATGCATCTCGACCTCCGTAACAACAAGATCTCCGGGCCTATCCCACGGGCCTTCGGAAACCTTCAAATGCTTAGCCGGGCCTTACTAAGTGGAAACCAGATCAGCGGGCCCATTCCTGAATCACTCACTCGAATTTACCGCTTAGCGGATCTAGATCTATCACGAAACCTAATTTCCGGGCCCATACCCTCATCGCTGGGTAAAATGGCGGTTCTCTCCACATTAAACTTGGATATGAACAGGCTTTCGGGGGCCATACCCGTGAGCCTGTTTAGTTCTGGAATAAGTGACTTAAACATAAGTCGTAACAGCTTAGATGGTAAAATCCCAGACGCCTTCGGTGTTAGGTCTTACTTCACCGTTCTTGATTTGTCTTACAATAAGCTTAGTGGGCCCATTCCGAAATCCATAACTTCAGCTTCCTATGTGGGCCACTTGGATTTAAGTCACAACCATCTCTGCGGCCCAATTCCGACGGGCTCACCGTTCGATCACCTCGAAGCGTCGTCGTTTGTGTTCAACGATTGCCTCTGCGGAAAGCCCCTCAACAAGCCTTGTTAA 1125 0.544 MGGVSCTRQTTPAAAALAVVLLVMCSTVSSCPPSDRAALLAFKAALHEPHLGIFNSWTGADCCNKWYGVSCDQETRRVADINLRGESEEPIFERAHRTGYMTGYISPKICKLKRLSSITIADWKGISGEIPRCITSLPFLRIVDLIGNQISGTIPSDIGRLHRLTVLNVADNAISGWIPPSLTNVTSLMHLDLRNNKISGPIPRAFGNLQMLSRALLSGNQISGPIPESLTRIYRLADLDLSRNLISGPIPSSLGKMAVLSTLNLDMNRLSGAIPVSLFSSGISDLNISRNSLDGKIPDAFGVRSYFTVLDLSYNKLSGPIPKSITSASYVGHLDLSHNHLCGPIPTGSPFDHLEASSFVFNDCLCGKPLNKPC* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0331 374 Pfam Leucine rich repeat 163 222 IPR001611 GO:0005515
Ahy18g0331 374 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 14 374 - -
Ahy18g0331 374 SUPERFAMILY L domain-like 30 370 - -
Ahy18g0331 374 Gene3D Ribonuclease Inhibitor 95 374 IPR032675 -
Ahy18g0331 374 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Ahy18g0331 374 Gene3D Ribonuclease Inhibitor 28 94 IPR032675 -
Ahy18g0331 374 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 14 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0331 Ahy-Chr18 2800855 2802308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy18g0331 74 374 Receptor kinase-like Gene Family AT5G46330 35.207 1.49e-46 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0331 - - gmx:100804739 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0331 18 2800855 2802308 Ahy18g0331 18 2800855 2802308 ECH
Ahy18g0331 18 2800855 2802308 Ahy13g0569 13 5916880 5918299 ECH
Ahy18g0331 18 2800855 2802308 Ahy8g1137 8 26579513 26580960 hybridization
Ahy18g0331 18 2800855 2802308 Ahy13g0569 13 5916880 5918299 PCT
Ahy13g0569 13 5916880 5918299 Ahy18g0331 18 2800855 2802308 PCT