Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0569 ATGCCTGTAACAGCAGCAGCCACCTTACTATTTCTCGCGGCGGTAATTTCCGCCGCGAACTCGTGTCCGCCCTCCGACCGGGAAGCACTATTAGCCTTTAAGGCTGCTCTCCGGGAGCCGTACAACGGCGGAATCTTCAACTCCTGGACCGGCACTAACTGCTGCCGGAACTGGCTCGGCGTAGCATGCGACCAGAACTCCGGCAGAGTAGCCGAGATCAACCTCCGTGCCACCACGCTCTACACAACGTTCGAGAAGCCTCATCGCCAGGGATACATGGCCGGTCACATCTCCCCGGAGATCTGCAAACTCGCTAGCCTCTCCAGCATCGTCATCACCGACTGGCAAGGAATCTCCGGCGACGTTCCTCCCTGCATCACCTCCCTCTCCTTCCTCCGCATCATCGATCTCACTGGAAACCGAATCACCGGAACTCTCCCCTCCAACATCGGAAACCTCCGGCAGCTGACGCATCTTAGCGCCGCCGACAACTCCATCACCGGCGTAATACCGGCATCGATTTCGTCGTTGACCGGATTAACGTACCTTGACCTCCGTAACAACAGAATCTCTGGCCCGATCCCGAACAGTTTGGGCCAACTAAGGTTTCTGAGCCGGGCCTTCCTTAACGGGAACCAGATTAGTGGGCCAATTCCGGGCTCAATTTCTCGAATGTATCGTCTCGTGGATCTGGATCTGTCTCGAAACAGGCTATCGGGGTCCATACCTGAATCATTGGGCCGAATGCCAGTTCTAGCAACACTAAATTTGAATACAAACAACCTTTCGGGAAAGATTCCATCGGGCCTGTTGGGCTCAGGTATCAGTGATTTGGACTTGAGCCATAACATGCTGGAGGGTTATATACCTGATTCGTTTGGGCCCAAGTCTTATTTTACGTGTTTGGAATTAGGTTACAATAATTTTAGGGGTTCGATCCCTAAATCCATTGCTAAAGCTGCGTTTATTGGGTTTCTTGATTTGAGCTATAATCACTTGTGTGGCCCAATTCCAAAGGGTGGTGTGTTTGATACTCTTGATGAGTCCTCATTCGCCCACAATGATTGTCTCTGTGGGAAGCCACTACTCAAAGCTTGCTAA 1101 0.5213 MPVTAAATLLFLAAVISAANSCPPSDREALLAFKAALREPYNGGIFNSWTGTNCCRNWLGVACDQNSGRVAEINLRATTLYTTFEKPHRQGYMAGHISPEICKLASLSSIVITDWQGISGDVPPCITSLSFLRIIDLTGNRITGTLPSNIGNLRQLTHLSAADNSITGVIPASISSLTGLTYLDLRNNRISGPIPNSLGQLRFLSRAFLNGNQISGPIPGSISRMYRLVDLDLSRNRLSGSIPESLGRMPVLATLNLNTNNLSGKIPSGLLGSGISDLDLSHNMLEGYIPDSFGPKSYFTCLELGYNNFRGSIPKSIAKAAFIGFLDLSYNHLCGPIPKGGVFDTLDESSFAHNDCLCGKPLLKAC* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0569 366 SMART LRR_typ_2 177 201 IPR003591 -
Ahy13g0569 366 SMART LRR_typ_2 249 273 IPR003591 -
Ahy13g0569 366 SMART LRR_typ_2 129 153 IPR003591 -
Ahy13g0569 366 SMART LRR_typ_2 225 248 IPR003591 -
Ahy13g0569 366 Gene3D Ribonuclease Inhibitor 19 90 IPR032675 -
Ahy13g0569 366 Gene3D Ribonuclease Inhibitor 91 366 IPR032675 -
Ahy13g0569 366 Pfam Leucine rich repeat 209 262 IPR001611 GO:0005515
Ahy13g0569 366 Pfam Leucine rich repeat 132 190 IPR001611 GO:0005515
Ahy13g0569 366 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
Ahy13g0569 366 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 366 - -
Ahy13g0569 366 SUPERFAMILY L domain-like 21 363 - -
Ahy13g0569 366 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 2 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0569 Ahy-Chr13 5916880 5918299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g0569 93 366 Receptor kinase-like Gene Family AT3G11080 25.938 8.54e-22 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0569 - - gmx:100804365 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g0569 13 5916880 5918299 Ahy13g0569 13 5916880 5918299 ECH
Ahy18g0331 18 2800855 2802308 Ahy13g0569 13 5916880 5918299 ECH
Ahy18g0331 18 2800855 2802308 Ahy13g0569 13 5916880 5918299 PCT
Ahy8g1137 8 26579513 26580960 Ahy13g0569 13 5916880 5918299 PCT
Ahy13g0569 13 5916880 5918299 Ahy18g0331 18 2800855 2802308 PCT
Ahy13g0569 13 5916880 5918299 Ahy8g1137 8 26579513 26580960 PCT