Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0306 ATGGCTTCAAGCAATGGCATCCCCGCAACCGGAAGCGGTCTCGTCGTCAGCTTCGGCGAGATGCTCATCGACTTCGTTCCCACCGTCTCCGGCGTCTCCCTCGCTGAGGCTCCTGGATTCCTCAAGGCTCCCGGCGGCGCCCCCGCTAACGTGGCCATCGCCGTCGCCAGACTCGGCGGCAAGGCCGCTTTCGTCGGCAAGCTCGGCGATGACGAGTTCGGTCACATGCTTGCCGGGATCTTGAAGGAAAACGGCGTCGTCGCCGACGGGATCACCTTTGACCAGGGCGCACGTACGGCGTTGGCGTTCGTAACCCTACGCGCCGACGGGGAGCGTGAATTCATGTTCTACAGAAACCCCAGCGCCGACATGCTCCTCAAGCCCGAAGAACTCAACCTCGAACTCATCAGATCTGCAAAGGTGTTCCATTATGGTTCAATAAGCTTGATCGTGGAGCCATGCAGATCGGCACACCTGAAGGCAATGGAAGTAGCCAAGGACGCCGGGTGCCTTCTCTCCTACGATCCAAATCTGAGGCTGCCATTGTGGCCATCGGCCGAGGAAGCTCGCAAGCAAATCCGAAGCATATGGGAGAAGGCTGATTTGATCAAGGTCAGCGATGTTGAGCTCGAGTTCCTCACTGAAAGTGACAAGATTGATGATGAGGCTGCCATGTCCTTGTGGCACCCCAACTTGAAGTTGCTCCTTGTCACCCTTGGTGAACATGGTTCTAGGTACTACACCAAGAATTTCCATGGATCAGTAGATGCTTTCCATGTAAATACAGTTGATACAACTGGCGCTGGCGATTCCTTTGTCGGTTCTCTTTTGGCCAAGATTGTTGACGACCAATCCATTCTTGAGGATGAAGCAAGGCTAAGATCAGTTCTCACTTATTCAAATGCATGTGGAGCAATCACCACCACCAAAAAGGGAGCAATCCCTGCCCTTCCCAAGGATGAAGATGTGTTGGCCCTCATCAGGGGAGCATAG 993 0.5458 MASSNGIPATGSGLVVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVARLGGKAAFVGKLGDDEFGHMLAGILKENGVVADGITFDQGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKAMEVAKDAGCLLSYDPNLRLPLWPSAEEARKQIRSIWEKADLIKVSDVELEFLTESDKIDDEAAMSLWHPNLKLLLVTLGEHGSRYYTKNFHGSVDAFHVNTVDTTGAGDSFVGSLLAKIVDDQSILEDEARLRSVLTYSNACGAITTTKKGAIPALPKDEDVLALIRGA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0306 330 PANTHER HEXOKINASE FAMILY MEMBER 20 329 - -
Ahy18g0306 330 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Ahy18g0306 330 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Ahy18g0306 330 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Ahy18g0306 330 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Ahy18g0306 330 PANTHER BNAA04G18320D PROTEIN 20 329 - -
Ahy18g0306 330 Gene3D - 13 330 IPR029056 -
Ahy18g0306 330 SUPERFAMILY Ribokinase-like 15 327 IPR029056 -
Ahy18g0306 330 CDD bac_FRK 14 314 - -
Ahy18g0306 330 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0306 Ahy-Chr18 2518238 2521390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0306 K00847 - gmx:100803713 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0306 18 2518238 2521390 Ahy18g0306 18 2518238 2521390 ECH
Ahy18g0306 18 2518238 2521390 Ahy8g1102 8 26056879 26059862 hybridization
Ahy18g0306 18 2518238 2521390 Ahy13g0602 13 6262610 6264256 PCT
Ahy13g0602 13 6262610 6264256 Ahy18g0306 18 2518238 2521390 PCT