Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g0602 ATGGCTTCCACCACCGCCCTCCCAGCCACCGGTTCCGGTCTCATTGTAAGCTTCGGCGAGATGCTCATCGACTTCGTCCCCACCGTTTCTGGCGTTTCCCTCGCCGAAGCCCCAGGCTTCCTCAAGGCACCCGGCAGCGCTCCTGCCAACGTCGCCATCGCCGTCTCTCGCCTCGGCGGCAAGTCCGCCTTCGTCGGCAAGTCCGCCTTCGTCGGCAAGCGCGGCGATGATGAGTTTGGCCACATGCTCGCCGGAATCCTCAAGGAAAACAACGTCGTCGCAGACGGCATCGCCTTCGTGACACTGCGCGCCGACGGCGAGTGTGAGTTCATGTTCTATGGGAATCCCAGCGCCGATATGCTCCTCAAGCCCGAAGATCTCAATCTCGATCTCATCAGATCTGTATGCAAAAATCTCTCCCTCTCCCTCTCTCTCTTGTCAACTTTCTCGGGAAAGTTTACCTTTTCTTTTCATTTTCCGTTAAAATCCCGAAGCTACAGTAGCACGTGTTCGTCACGTGCTACGAGCATATGGGAGAAGGCTGACGTCATCAAGGTGAGTGACAATGAGCTGGAGTTCCTTACCGGCAGCGACAAGATCGACTATGCTTCTGCCCTCTCCCTCTGGCACCCCAACTTGAAGCTTCTCCTTGTCACCCTTGGTGAACATGGTTCCAGATACTACACCAAGAAATTCCATGGACAAGTGGATGGTTTTCGTGTTGACACAGTAGATACAACTGGCGCTGGTGATTCCTTTGTTGGCGCTCTACTATGCAAGATTGTCGACGATCATTCCATTCTTGAAGACGAAGCAAGGTTAAGGGACGTAATCAAGTTTGCAAATGCATGTGGGGCAATTACAACTATCAAAAAGGGAGCCATTCCAGCTCTTCCTGCAGAGCATGAAGCCCTTAAGCTCATCAATGGAGCATAG 936 0.531 MASTTALPATGSGLIVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGSAPANVAIAVSRLGGKSAFVGKSAFVGKRGDDEFGHMLAGILKENNVVADGIAFVTLRADGECEFMFYGNPSADMLLKPEDLNLDLIRSVCKNLSLSLSLLSTFSGKFTFSFHFPLKSRSYSSTCSSRATSIWEKADVIKVSDNELEFLTGSDKIDYASALSLWHPNLKLLLVTLGEHGSRYYTKKFHGQVDGFRVDTVDTTGAGDSFVGALLCKIVDDHSILEDEARLRDVIKFANACGAITTIKKGAIPALPAEHEALKLINGA* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g0602 311 SUPERFAMILY Ribokinase-like 15 307 IPR029056 -
Ahy13g0602 311 PANTHER BNAA04G18320D PROTEIN 19 134 - -
Ahy13g0602 311 Pfam pfkB family carbohydrate kinase 14 300 IPR011611 -
Ahy13g0602 311 CDD bac_FRK 14 295 - -
Ahy13g0602 311 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 245 258 IPR002173 GO:0016773
Ahy13g0602 311 PANTHER HEXOKINASE FAMILY MEMBER 176 308 - -
Ahy13g0602 311 PANTHER HEXOKINASE FAMILY MEMBER 19 134 - -
Ahy13g0602 311 PANTHER BNAA04G18320D PROTEIN 176 308 - -
Ahy13g0602 311 Gene3D - 13 311 IPR029056 -
Ahy13g0602 311 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Ahy13g0602 311 PRINTS Ribokinase signature 176 191 IPR002139 GO:0016301
Ahy13g0602 311 PRINTS Ribokinase signature 216 227 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g0602 Ahy-Chr13 6262610 6264256 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy13g0602 K00847 - gmx:100812560 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy18g0306 18 2518238 2521390 Ahy13g0602 13 6262610 6264256 PCT
Ahy8g1102 8 26056879 26059862 Ahy13g0602 13 6262610 6264256 PCT
Ahy13g0602 13 6262610 6264256 Ahy18g0306 18 2518238 2521390 PCT
Ahy13g0602 13 6262610 6264256 Ahy8g1102 8 26056879 26059862 PCT