Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy18g0066 ATGGGTGCTTGTCTTGGACGATATAAGCAGCCCACATTAATCAGTTCTGTGGATGTGCCACCAAAAGGATTGACAAAGCAAGGTAAGCCGGTGAAGAAACCTAGCACATCAGAAGATTTCTGGACCACCAGCACGTATGATATGGACAACAGTGCTGTTCAGTCACAAGGAAGCATCTCATCAACCAGTGTAACAAACCAAGCTGCAGATCCTGGCAACCCTGCTGAATTTGTGAATCATGGTCTTATTCTCTGGAATCAGACTCGACAACGTTGGATTGGAAATAAGAAATCTGAGAACCAAGCACAACAATTGCGAGAACCCAAATTGAGTTGGAATGCAACGTATGAAAGTTTATTGGGGAGTAACAAGCCGTTCCCCCAGCCTATCCCTCTTGCGGAAATGGTAGATTTTCTTGTGGACATTTGGGAACAAGAGGGCCTCTATGACTGA 453 0.4503 MGACLGRYKQPTLISSVDVPPKGLTKQGKPVKKPSTSEDFWTTSTYDMDNSAVQSQGSISSTSVTNQAADPGNPAEFVNHGLILWNQTRQRWIGNKKSENQAQQLREPKLSWNATYESLLGSNKPFPQPIPLAEMVDFLVDIWEQEGLYD* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy18g0066 150 PANTHER DUF4050 FAMILY PROTEIN 3 150 - -
Ahy18g0066 150 PANTHER OS07G0479600 PROTEIN 3 150 - -
Ahy18g0066 150 Pfam Protein of unknown function (DUF4050) 109 150 IPR025124 -
Ahy18g0066 150 Pfam Protein of unknown function (DUF4050) 44 108 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy18g0066 Ahy-Chr18 438897 442062 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy18g0066 - - adu:107459559 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g0157 19 1649804 1652616 Ahy18g0066 18 438897 442062 ECH
Ahy11g2750 11 144191352 144194309 Ahy18g0066 18 438897 442062 ECH
Ahy16g3121 16 147175987 147180611 Ahy18g0066 18 438897 442062 ECH
Ahy18g0066 18 438897 442062 Ahy18g0066 18 438897 442062 ECH
Ahy18g0066 18 438897 442062 Ahy7g2243 7 80677424 80680592 hybridization