Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3121 ATGCAATTCTGTAGATACTTTCCACCTTGGTTTTGTCAAATTCTTGCGTATATGGGAGGTTGCCTTGGATGCTTCACAAAACCTTCAGTAACTATTCCAATGGATGAGCCATCTAAAGGACTAAGAACTCAAGGTCAAACAGTAAATAAAGACAACAGAACAGAAGATATCTGGAGCAGCAGCACTTTTGAAATGGATAATAGTGCTGCACAGTCCCAGAGAAGCATCTCATCGATCGTAATGTCAAATAATCCTTCTGATCCTCAAAGTAGTACCGGGAGTGAAATTGGTCCGGCTGAATTTGTCAACCATGGTCTTCTTCTCTGGCATCAGATAAGACAGCAATGGGTTGGGAATAAAATCTCCGAGAGTCAGAAGGAAGTTCGAGAACCGAGAATAAGTTCGAACGCCACCTACGACAACCTTCTCGGAAACAACAAACACTTTCCTCAACCAATCCCTCTGAGAGAAATGGTTGACTTTCTTGTTGATATTTGGGAGCAAGAGGGTCTATATGACTGA 522 0.4215 MQFCRYFPPWFCQILAYMGGCLGCFTKPSVTIPMDEPSKGLRTQGQTVNKDNRTEDIWSSSTFEMDNSAAQSQRSISSIVMSNNPSDPQSSTGSEIGPAEFVNHGLLLWHQIRQQWVGNKISESQKEVREPRISSNATYDNLLGNNKHFPQPIPLREMVDFLVDIWEQEGLYD* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3121 173 MobiDBLite consensus disorder prediction 74 95 - -
Ahy16g3121 173 Pfam Protein of unknown function (DUF4050) 134 173 IPR025124 -
Ahy16g3121 173 Pfam Protein of unknown function (DUF4050) 61 131 IPR025124 -
Ahy16g3121 173 PANTHER OS07G0479600 PROTEIN 7 173 - -
Ahy16g3121 173 PANTHER DUF4050 FAMILY PROTEIN 7 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3121 Ahy-Chr16 147175987 147180611 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3121 - - gmx:100818696 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3121 16 147175987 147180611 Ahy16g3121 16 147175987 147180611 ECH
Ahy16g3121 16 147175987 147180611 Ahy19g0157 19 1649804 1652616 ECH
Ahy16g3121 16 147175987 147180611 Ahy18g0066 18 438897 442062 ECH
Ahy16g3121 16 147175987 147180611 Ahy18g2686 18 129974635 129979103 ECH
Ahy11g2750 11 144191352 144194309 Ahy16g3121 16 147175987 147180611 ECH
Ahy16g3121 16 147175987 147180611 Ahy6g2425 6 108738708 108743387 hybridization