Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g3149 ATGTGGGAATCTATCGTTTTGACGGTGGTTGCCACCGCCGGCAACAACGTCGGCAAGATCCTTCAGAAGAAGGGCACACTCATTCTCCCCCCTCTCTCTTTCAAGCTCAAGGTCATAAAGGCATATGCTTCAAACAAAACCTGGTTGATAGGTTTTCTTATGGACATAATTGGGGCACTGTTGATGTTAAGGGCACTTTCTCTAGCTCCTGTCTCTGTTATCCAACCAGTTTCTGGCAGTGGACTGGCCATTCTTTCAATCTTTTCTCATTTTTATCTTAAGGAAGTCATGAATATTGTTGATTGGGTTGGCATTACCTTGGCAGGTTTTGGCACAATAGGAGTTGGTGCTGGAGGTGAGGAGCAAGAGGCTGCTGCTCTATCCATTTTATGTGTACCGTGGCTGGCATTTGTCGTTTTCATCTTGTTTATACTACTTAATGCATGGCTTCGTATATGCAAACGTCATCGCAGAGAACAAGAGATGATGGAATATGATGTTGTTGAGGAAATCATATATGGCTTGGAATCTGGAATTCTGTTTGGGATGGCTTCTGTAATTTCAAAGATGGGATTTTTATTCCTGGAGCAAGGTTTCCCCAGCCTGTTGGTTCCTATGTGCATCATCATCAGTGTATTCTTTAGTGGTGCAGGCTTATTCTACCAGACACGCGGCCTAAAGCATGGGAGGGCTATTATAGTTTCTACATGTGCAGCTGTGGCATCAATTTTGACTGGTGTACTTGCTGGGATGCTTGCTTTAGGCGAGCGACTCCCTTCAGCCCCAAAAGCTCGTTTCGCACTTCTTCTTGGATGGCTGCTTATCATTGTTGGCGTGGTTTTACTTGTGGGTTCAAAAAGGCTGGTGAGATTTCTTAGAGTTCCTTCGCGCCGTGTTAAGAATTATGGCACTCGAAGAGCCGGGACATCCCATATCAAGGAACCAAGCCCGACTGCTGTCGTTCAAGCAGCAACGTTGAATCATTTACTATCATCAACTTCAAAAGAAAAAGCTTGA 1017 0.4474 MWESIVLTVVATAGNNVGKILQKKGTLILPPLSFKLKVIKAYASNKTWLIGFLMDIIGALLMLRALSLAPVSVIQPVSGSGLAILSIFSHFYLKEVMNIVDWVGITLAGFGTIGVGAGGEEQEAAALSILCVPWLAFVVFILFILLNAWLRICKRHRREQEMMEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPSLLVPMCIIISVFFSGAGLFYQTRGLKHGRAIIVSTCAAVASILTGVLAGMLALGERLPSAPKARFALLLGWLLIIVGVVLLVGSKRLVRFLRVPSRRVKNYGTRRAGTSHIKEPSPTAVVQAATLNHLLSSTSKEKA* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g3149 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 185 286 - -
Ahy17g3149 338 PANTHER MAGNESIUM TRANSPORTER NIPA9-RELATED 1 335 - -
Ahy17g3149 338 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
Ahy17g3149 338 Pfam Magnesium transporter NIPA 20 286 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ahy17g3149 338 Gene3D - 4 118 - -
Ahy17g3149 338 PANTHER UNCHARACTERIZED 1 335 IPR008521 GO:0015095|GO:0015693|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g3149 Ahy-Chr17 133240913 133244382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g3149 - - gmx:100788141 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g3149 17 133240913 133244382 Ahy17g3149 17 133240913 133244382 ECH
Ahy17g3149 17 133240913 133244382 Ahy8g0859 8 16801078 16804442 hybridization
Ahy16g3300 16 149908073 149912154 Ahy17g3149 17 133240913 133244382 PCT
Ahy6g2597 6 111203623 111207590 Ahy17g3149 17 133240913 133244382 PCT
Ahy17g3149 17 133240913 133244382 Ahy16g3300 16 149908073 149912154 PCT
Ahy17g3149 17 133240913 133244382 Ahy6g2597 6 111203623 111207590 PCT