Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3300 ATGTGGGAATCCATTGTGTTAACGGTGGCTGCCACCGCCGGAAACAACATCGGAAAAATCCTTCAGAAGAAGGGCACCGTCATTCTTCCTCCTCTCTCTTTGAAGCTCAAGGTGATAAGGGCTTATGCATTTAACAAAATCTGGGTTATAGGTTTTCTGATGGATATAGGTGGTGCATTATTGATGTTAAGAGCATTATCTTTGGCCCCGGTATCTGTGATCCAACCGGTTTCGGGAGTCGGACTAGCAATTCTTTCAATCTTCTCTCATTTTTATCTGAAGGAAATCATGAATGCTGTTGATTGGGTTGGCATTGCCTTGGCAGGTGTTGGCACAATAGGTAATGAGTTGGTGCCGGAGGTGAAGAGCAAGAGGCGGCTACTCTGTCCATTTTTCACATACCATGTCTGGCATTTGTTGTTGCCATCTTGTTTGTATTGCTTAATGGAGGGCTTAGAATATGCAGGCGTCATCGAAGAGAACAAGAGATGTTATATACAGATGGAATACGATGTTGTTGAGGAAATTATTTATGGCTTGGAATCTGGAATTTTGTTTGGGATGTCTTCGGTAATTTCGAAGATGGGATTTCTGTTCCTAGAGCAAGGTTTTCACCAACTGTTGGTTCCTCTGTGCATCATATTCAGTGTGTGTTGTAGTGGAACAGGGTTTTACTACCAGACACGGGGACTAAAGCACGGTAGGGCTATTGTGGTTTCTACATGTGCAGCCGTGGCATCAATTGTGAGCGGTGTACTAGCTGGAATGCTTGCATTGGGTGAAAGACTGCCTTCTGCCCCGAAAGCTCGCTTGGCACTTCTTCTTGGATGGCTACTTATAATCACGGGTGTAATTTTACTCGTTGGTTCGACGCGGCTAGTGAAATTTCTCTCGTGTTCTTCAGGACGCACAAAAAGAAGCAATGCTGATAAGAGTTACAGCGCTAGGAGACCAAGTTCTTTGCGTATAAGGGAACCGAATCCAAGCGCCGTGATACCAGCCACGACGTTAAATCATCTGCTACCATCGGCTTCCAAAGAAAAAGCATGA 1050 0.4486 MWESIVLTVAATAGNNIGKILQKKGTVILPPLSLKLKVIRAYAFNKIWVIGFLMDIGGALLMLRALSLAPVSVIQPVSGVGLAILSIFSHFYLKEIMNAVDWVGIALAGVGTIGNELVPEVKSKRRLLCPFFTYHVWHLLLPSCLYCLMEGLEYAGVIEENKRCYIQMEYDVVEEIIYGLESGILFGMSSVISKMGFLFLEQGFHQLLVPLCIIFSVCCSGTGFYYQTRGLKHGRAIVVSTCAAVASIVSGVLAGMLALGERLPSAPKARLALLLGWLLIITGVILLVGSTRLVKFLSCSSGRTKRSNADKSYSARRPSSLRIREPNPSAVIPATTLNHLLPSASKEKA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3300 349 Pfam Magnesium transporter NIPA 18 113 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ahy16g3300 349 Gene3D - 4 121 - -
Ahy16g3300 349 PANTHER MAGNESIUM TRANSPORTER NIPA9-RELATED 1 346 - -
Ahy16g3300 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 114 - -
Ahy16g3300 349 PANTHER UNCHARACTERIZED 1 346 IPR008521 GO:0015095|GO:0015693|GO:0016021
Ahy16g3300 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 202 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3300 Ahy-Chr16 149908073 149912154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3300 - - ahf:112697651 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3300 16 149908073 149912154 Ahy6g2597 6 111203623 111207590 hybridization
Ahy16g3300 16 149908073 149912154 Ahy17g3149 17 133240913 133244382 PCT
Ahy16g3300 16 149908073 149912154 Ahy8g0859 8 16801078 16804442 PCT
Ahy17g3149 17 133240913 133244382 Ahy16g3300 16 149908073 149912154 PCT
Ahy8g0859 8 16801078 16804442 Ahy16g3300 16 149908073 149912154 PCT