Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2257 ATGGAGCATAATAAGCTCACATTAATAAATCCAATCTCAGTACTAATAACACTTTGTGTATTAGTATCAGAGGGGAAAGCAACTACCTTCACACTACTCAACAAATGTGACTACACTGTGTGGCCGGGAATTCTCACTAACGCTGGTGTCGACCCTCTTCCGGTCACCGGCTTCGCCCTCCGAACTGGCGAGTCCAAAACCATCACGGCACCAACCACCTGGGGTGGCCGTTTCTGGGGCAGGACACTCTGCGCCCAAGACTCCGCCGGAAAATTCTCATGCGGCACTGGCGATTGCGGCTCCGGCAAACTAGAATGTGCTGGCAGCGGTGCCACGCCGCCGGCAACCCTGGCAGAGTTCACCCTCCATGGCGCCGGAGGACTAGATTTCTTTGACGTCAGCTTGGTCGACGGTTACAACCTCCCGATTACGGTGGTTCCGCAGGGTGGCTCCGGCGAAAACTGCACCGTCACGGGGTGCGTAGGAGACCTCAATGGCGATTGTCCATCGGAGCTGAGGGTTATGAGCGAGGATGGGAAACGTGGCGTGGCGTGTAAGAGCGCGTGCGATGCGTTCCGGTTGCCGCAGTATTGCTGCGACGGCGCGTACCGCTCACCGGACACTTGCAAGCCTTCGTCTTACTCGAAGGTGTTCAAGAGCGTGTGCCCACGCGCGTATAGCTACGCGTATGACGACAAGACGAGCACATTTACGTGCGCATCTGCCGATTACACCATTACGTTTTGTCCTTCCCCCGATACTAACCCCAGTAGTAAGAAATCGTGGGAGGGACAAAACTCGAACTCAGATAGTAACGAATCTTCTTCGTCATCATCTTCATCTTCGTCTTCTACTCCAACATCACCACAGGTGAGCAAGGGAGGAATGGTGTACGTAGGTGCACTAGACCAAAGTGAAATACCATGGTCAGCGTGCACTCGTGCTAGGGAATCCCAATCCATTGCAACCTTCATCGTCATTATGGCAAGTTGGCGCTTGTGGCAACTGCTCTTTTAG 1017 0.5388 MEHNKLTLINPISVLITLCVLVSEGKATTFTLLNKCDYTVWPGILTNAGVDPLPVTGFALRTGESKTITAPTTWGGRFWGRTLCAQDSAGKFSCGTGDCGSGKLECAGSGATPPATLAEFTLHGAGGLDFFDVSLVDGYNLPITVVPQGGSGENCTVTGCVGDLNGDCPSELRVMSEDGKRGVACKSACDAFRLPQYCCDGAYRSPDTCKPSSYSKVFKSVCPRAYSYAYDDKTSTFTCASADYTITFCPSPDTNPSSKKSWEGQNSNSDSNESSSSSSSSSSSTPTSPQVSKGGMVYVGALDQSEIPWSACTRARESQSIATFIVIMASWRLWQLLF* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2257 338 PANTHER OS03G0233200 PROTEIN 11 277 IPR001938 -
Ahy17g2257 338 PANTHER BNAA02G17480D PROTEIN 11 277 - -
Ahy17g2257 338 MobiDBLite consensus disorder prediction 256 292 - -
Ahy17g2257 338 Pfam Thaumatin family 34 250 IPR001938 -
Ahy17g2257 338 CDD TLP-PA 29 249 - -
Ahy17g2257 338 SMART tha2 30 250 IPR001938 -
Ahy17g2257 338 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Ahy17g2257 338 SUPERFAMILY Osmotin, thaumatin-like protein 28 251 IPR037176 -
Ahy17g2257 338 Gene3D Thaumatin 28 250 IPR037176 -
Ahy17g2257 338 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Ahy17g2257 338 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Ahy17g2257 338 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Ahy17g2257 338 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Ahy17g2257 338 ProSiteProfiles Thaumatin family profile. 27 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2257 Ahy-Chr17 109421305 109424399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2257 12 276 Receptor kinase-like Gene Family AT5G38280 50.746 3.33e-87 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2257 - - gmx:100795186 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2257 17 109421305 109424399 Ahy15g0405 15 4713222 4714968 ECH
Ahy17g2257 17 109421305 109424399 Ahy17g2257 17 109421305 109424399 ECH
Ahy15g0404 15 4698260 4699786 Ahy17g2257 17 109421305 109424399 ECH
Ahy17g2257 17 109421305 109424399 Ahy8g0135 8 2442276 2446299 hybridization