Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0404 ATGGCTCTGTTTTCCTACCACCGACATTCTTCTCAGCCCTTCTTCACTTTCTTCCTTTTCCTCCTCCTTAAAGGGGTTTCAGGTGCAACATTCACGTTCGTAAACAAGTGCGATCACACAGTATGGCCAGGGATCTTGGGCAAACCAGATATCGGAAGCACAGGTTTCGAGCTCTCAAAGGGTTCCACAAAGAGTTTCCAAGCTCCTACGGGCTGGTCGGGAAGATTCTGGGGCAGAACCGATTGCAAATTCGACGATCAAGGCAAAGGAACATGCGCCACCGCCGACTGCGGCTCCGGCGAGATCAACTGCAACGGAGGCGGAGCCTCTCCTCCGGCCACCCTCGCCGAGTTCACTCTCGGCACCGGTTCCATGGACTACTACGACGTCAGCCTCGTCGACGGCTACAATCTCCCCATGATGGTGGAGGCCAGCGGCGGCACCGGCTCGTGCGGCGCCACGGGATGCGGCGCTGACTTAAACAAGCGGTGCCCGTCGGAGCTTCGAGTGGAGGGCGGTGACGCGTGCCGCAGCGCGTGTGATGCATTCAAGAAACCGGAGTATTGCTGCGACGGAGAATTCGGAAACCCTAACACGTGTAAGCCATCTGTGTACTCTGAAATGTTCAAGAGTGCATGCCCCAAATCTTATAGCTATGCTTATGATGATGCCACCAGCACTTTCACTTGCTCCGATGCTGATTACACCATCACATTTTGTCCCTCTTCTCCGAGTCTAAAATCTTCTACGGATTCATCCCCCAAGGCAGCGGGTTCAGATTCGGGTTCGGATTTAGGGTCGGGGTCAGGTTCGTCGGTGGAGCAGTCGGCACTAGGTTCCACATCATGGCTAGCGGATATGGCTACGGCCACCGGGTCGGCGTCCACAAGAAGCAAGCCTTTTGGGGGATCAATTTTGGTGGCGGTTGCTTTCTTTCTTTCTCTTTTGCTAGCTTAG 957 0.5486 MALFSYHRHSSQPFFTFFLFLLLKGVSGATFTFVNKCDHTVWPGILGKPDIGSTGFELSKGSTKSFQAPTGWSGRFWGRTDCKFDDQGKGTCATADCGSGEINCNGGGASPPATLAEFTLGTGSMDYYDVSLVDGYNLPMMVEASGGTGSCGATGCGADLNKRCPSELRVEGGDACRSACDAFKKPEYCCDGEFGNPNTCKPSVYSEMFKSACPKSYSYAYDDATSTFTCSDADYTITFCPSSPSLKSSTDSSPKAAGSDSGSDLGSGSGSSVEQSALGSTSWLADMATATGSASTRSKPFGGSILVAVAFFLSLLLA* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0404 318 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Ahy15g0404 318 ProSiteProfiles Thaumatin family profile. 28 241 IPR001938 -
Ahy15g0404 318 CDD TLP-PA 30 240 - -
Ahy15g0404 318 PANTHER OS03G0233200 PROTEIN 7 266 IPR001938 -
Ahy15g0404 318 SUPERFAMILY Osmotin, thaumatin-like protein 29 242 IPR037176 -
Ahy15g0404 318 MobiDBLite consensus disorder prediction 244 274 - -
Ahy15g0404 318 PRINTS Pathogenesis-related protein signature 88 117 IPR001938 -
Ahy15g0404 318 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Ahy15g0404 318 PRINTS Pathogenesis-related protein signature 54 63 IPR001938 -
Ahy15g0404 318 PRINTS Pathogenesis-related protein signature 30 42 IPR001938 -
Ahy15g0404 318 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Ahy15g0404 318 PRINTS Pathogenesis-related protein signature 231 240 IPR001938 -
Ahy15g0404 318 Gene3D Thaumatin 29 241 IPR037176 -
Ahy15g0404 318 SMART tha2 31 241 IPR001938 -
Ahy15g0404 318 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 7 266 - -
Ahy15g0404 318 Pfam Thaumatin family 35 241 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0404 Ahy-Chr15 4698260 4699786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0404 18 245 Receptor kinase-like Gene Family AT5G38280 47.561 3.98e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0404 - - gmx:100802906 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0404 15 4698260 4699786 Ahy15g0404 15 4698260 4699786 ECH
Ahy15g0404 15 4698260 4699786 Ahy17g2257 17 109421305 109424399 ECH