Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g1778 ATGGTTGAAACTGATGGAAGTGAAGAACAACCAAACCAGTCATCCACCATGAAGACAACTAAAATTTTTGGTCTCATTACAAACTCCATATTTCTGGGCTTAGGCACCTCCGGCGGCCCACTCGTTATGCGCCTCTACTTCATACACGGCGGAAAACGCATCTGGCTCTCTAGTTTCCTCGAAACCGCCGGCTTCCCTGTCATGCTCATTCCCCTTTCCATTTCCTATATACATCAAAGATGCAACAAAACAACCAACTCTGCAAAACCAAAGCTTATCTCTATGGAGCTTTCTCTGTTTCTTGCCTCCGCTATAGTAGGCATCCTCACCGGCCTCGACGACTACCTCTATGCCTACGGTGTATCTCTTCTTCCAGTGTCCACTTTTTCTCTTATTCAGGCCTCCCACCTCTCTTTCACTGCCGTCTTCGCTTTCCTATTGGTGAAGCAGAAGTTCACGGCTTATTCGGTGAACTCCATAGTTTTGTTGACCATTGCCGCTGTGGTTTTGGCGCTACGGTCCAGTGGGGACCGTCCTCACGGTGAGTCCACTGGGAAGTACATAGTTGGTTTTCTTATGATTGTAGCCGCGGCTGCATTATACGGGTTTGTTTTGCCTCTTGTGGAGTTGGTTTACAAGAAGACCAAGCAACATATCACTTATTCTTTGGTCATGGAGATTCAGTTCGTTATGTGCTTCTTTGCCACTTTTTTCTGCACTATTGGGATGATAATAAATAACGACTTTAAGGTGATTCCACGAGAAGCTAGAGATTATGAGCTTGGAGAAACAAAGTACTATTATGTGTTAGTGTGGAGTGCTATGATGTGGCAATTTTTCTTCTTGGGAGCAATAGGGGTTATCTTCTGTGCCTCGTCATTGTTGTCTGGGATTATAATTGCCGTGTTTCTGCCTGTTACTGAAGTGTTGGCTGTGATCTTGTACAAGGAGAATTTTGAAGCAGAGAAGGGGGTTGCTCTGGTACTTTCTCTGTGGGGCTTCGTGTCCTACTTCTATGGAGAGATCAAACAAGAATGGAAGAGGAACAAAAATCACCGCCTCAATACAGAGCAAGCTCAGTGTCCCCCTCGCTCTCTTATTCCATGA 1107 0.4544 MVETDGSEEQPNQSSTMKTTKIFGLITNSIFLGLGTSGGPLVMRLYFIHGGKRIWLSSFLETAGFPVMLIPLSISYIHQRCNKTTNSAKPKLISMELSLFLASAIVGILTGLDDYLYAYGVSLLPVSTFSLIQASHLSFTAVFAFLLVKQKFTAYSVNSIVLLTIAAVVLALRSSGDRPHGESTGKYIVGFLMIVAAAALYGFVLPLVELVYKKTKQHITYSLVMEIQFVMCFFATFFCTIGMIINNDFKVIPREARDYELGETKYYYVLVWSAMMWQFFFLGAIGVIFCASSLLSGIIIAVFLPVTEVLAVILYKENFEAEKGVALVLSLWGFVSYFYGEIKQEWKRNKNHRLNTEQAQCPPRSLIP* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g1778 368 Pfam Purine nucleobase transmembrane transport 25 345 - -
Ahy17g1778 368 PANTHER PURINE PERMEASE 7 359 - -
Ahy17g1778 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 98 175 - -
Ahy17g1778 368 PANTHER OS09G0467300 PROTEIN-RELATED 7 359 IPR030182 GO:0015211|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g1778 Ahy-Chr17 45263571 45265634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g1778 35 362 Organic Solute Cotransporters AT1G28230 58.806 1.37e-135 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g1778 - - gmx:100804831 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g1778 17 45263571 45265634 Ahy17g1778 17 45263571 45265634 ECH
Ahy17g1778 17 45263571 45265634 Ahy8g0699 8 13733874 13735572 hybridization
Ahy17g2997 17 130502731 130504818 Ahy17g1778 17 45263571 45265634 PCT
Ahy7g1708 7 62075660 62077629 Ahy17g1778 17 45263571 45265634 PCT
Ahy17g1778 17 45263571 45265634 Ahy17g0483 17 4654865 4656136 PCT
Ahy17g1778 17 45263571 45265634 Ahy7g0338 7 2747765 2750997 PCT