Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0483 ATGGGTGTCCTTGGAACAGTGGCAAGAAATTTGGATACAATAGTAGGGCCAGGAGCAATGCTTCTTTACCCTCTATATGCATCAATGAGGGCGATTGAGAGTCCTTCAACCTTAGATGATCAACAGTGGCTAACGTATTGGGTTTTGTACTCCTTCATAACCCTCTTTGAGCTTTCATTTCATAAGGTCCTATCTTGGTTGCCGTTTTGGCCATACATGAAGCTTGTAATATGCATGTGGCTGGTGCTGCCAATGTTCAATGGAGCAGCATATATATATGAGAATTATGTGAGGAGATACATAAATGTAACGAGCTATGGAGCTAATGATTATACCATGAAGAACAAGAAGGCGATTCAGATGATGAGCTTTGATGCTAGGAAAGCTGTTGAACGCTACATCGATAGGCATGGCCCTCAAGCCTTTGAAAAAGTTATCAGTGCTGCTGAGAGAGAAGCAAACAAGCACTGA 471 0.4225 MGVLGTVARNLDTIVGPGAMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSFITLFELSFHKVLSWLPFWPYMKLVICMWLVLPMFNGAAYIYENYVRRYINVTSYGANDYTMKNKKAIQMMSFDARKAVERYIDRHGPQAFEKVISAAEREANKH* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0483 156 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
Ahy17g0483 156 PANTHER HVA22-LIKE PROTEIN 3 148 - -
Ahy17g0483 156 PANTHER HVA22-LIKE PROTEINS 3 148 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0483 Ahy-Chr17 4654865 4656136 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0483 K17279 - gmx:100819566 257.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0483 17 4654865 4656136 Ahy7g0338 7 2747765 2750997 hybridization
Ahy17g0483 17 4654865 4656136 Ahy17g0483 17 4654865 4656136 PCT
Ahy17g0483 17 4654865 4656136 Ahy7g0338 7 2747765 2750997 PCT
Ahy7g0338 7 2747765 2750997 Ahy17g0483 17 4654865 4656136 PCT
Ahy17g1778 17 45263571 45265634 Ahy17g0483 17 4654865 4656136 PCT
Ahy8g0699 8 13733874 13735572 Ahy17g0483 17 4654865 4656136 PCT