Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0989 ATGGCGTCGATGGAGGAAGACGGCGGCGGCGGCGGCGGCGGCGGCGGAGGGAGCAACAAGAAGAGGATGGAGGCGATGATAAGTACGAGGCTGTCGGACGTGGTGTTGGACATAGTGATGCCGTACATCCACGACCCGAAGGACCGCGACGCCGTGTCGCAGGTGTGCCGGCGGTGGTACGAGCTGGACTCACTGACTCGGAAGCACGTGACCATCGCGCTCTGCTACACCACGTCACCGGACAGGCTCCGCCGCCGCTTCCCCCACTTGGAGTCCCTGAAGCTCAAAGGAAAGCCACGCGCCGCCATGTTCAACCTCATACCTGAGGATTGGGGCGGTTTCGTTACTCCTTGGGTTAAAGAGATCTCTCACTACTTCGATTGCCTTAAGAGCCTTCACTTTCGACGAATGATCGTTAGGGATATGGATCTTGAGCTTCTTGCTCGTTCCAGAGGCCATGTTCTTCAAGCTCTTAAGCTTGATAAGTGTTCTGGCTTCTCCACTGATGGACTCTACTATATTGCCAGATTTTGCAGGAATTTGAGAATCTTGTTTTTGGAGGAAAGCGCAGTAGTTGAGAACGATGGTGAATGGCTCCATCAGCTTGCTCTAAACAACACAGTTCTTGAGTCCCTCAATTATTACTTGACGGATATTAACAACCATGTTAGGATTCAGGACCTTGAGCTCATAGCCAGAAACTGCCCCAACTTAGCCTCTGTGAAGATCACTGATTCTGAAATCATGGATCTTGTCAACTTCTTCAGATATGCATCGTCACTCGAAGAATTCTCAGGGGGCACCTACAATGAGCCACCGGAGAGGTACAATGCCGTGGTGTTGCCAGCAAGGTTAAGCCGATTGGGTTTGACATACATTGGAAGTGATGAATTGCCGATTGTGTTCCCTTACGCCACACGACTCAAGAAATTGGACCTTCTATATGCATTGCTGGACACAGAGGATCACTGTAATTTAATTCAAAGGTGCCCCAACTTGGAAGTCTTAGAGTCAAGGAATGTAATTGGGGACAGAGGATTAGAAGTACTTGCCAGCAGTTGCAAGAAGCTAAAAAGGCTAAGAATCGAAAGAGGTGACGATGATCAAGGAATGGCTGAAGAAGCAGGCGTAGTTTCCCAGAGAGGACTAACTGCTTTGTCACAAGGCTGCCCCGAACTTGAATACATGGCTGTTTATGTATCTGACATCACAAACGCGTGTTTGGAACACATAGGCACCCACCTCAGAAACCTCTGCGATTTTCGCCTCGTCTTGCTCGACCGAGAGGAGAAGATCACTGATTTGCCCCTTGACAATGGGGTGAGGGCATTGCTAAGAGGTTGCAACAGACTGAGAAGATTCGCATTGTACCTTAGACCAGGTGGCCTCACTGACGTGGGGCTCGGTTACATAGGGCAATATAGCCCGAATGTTAGATGGATGTTACTCGGCTACGTTGGTGAAACCGATAGAGGACTCTTGGAGTTCTCAAAGGGTTGTCCAAGCCTTCAGAAGCTTGAGATGAGAGGGTGTTCATTTTTCAGTGAGTATGCATTGGCTATTGCAGCGACACGGTTGACTTCTCTGAGGTACCTTTGGGTGCAAGGCTATGGAGCGTCTCGTTCGGGGCGTGATCTTCTGGCAATGGCTAGACCATTTTGGAACATCGAGTTGATCCCTTCGAGGCGTGTGGCCATGAATGACAATGCTGAGGTCGAGCATCCAGCTCACATTCTTGCATACTACTCCCTTGCTGGACCGAGAAAAGATTTTCCAGATACTGTTATACCTTTGGATCCAGCAGCATATGTTAGAGATGAAGACAATTAG 1830 0.4962 MASMEEDGGGGGGGGGGSNKKRMEAMISTRLSDVVLDIVMPYIHDPKDRDAVSQVCRRWYELDSLTRKHVTIALCYTTSPDRLRRRFPHLESLKLKGKPRAAMFNLIPEDWGGFVTPWVKEISHYFDCLKSLHFRRMIVRDMDLELLARSRGHVLQALKLDKCSGFSTDGLYYIARFCRNLRILFLEESAVVENDGEWLHQLALNNTVLESLNYYLTDINNHVRIQDLELIARNCPNLASVKITDSEIMDLVNFFRYASSLEEFSGGTYNEPPERYNAVVLPARLSRLGLTYIGSDELPIVFPYATRLKKLDLLYALLDTEDHCNLIQRCPNLEVLESRNVIGDRGLEVLASSCKKLKRLRIERGDDDQGMAEEAGVVSQRGLTALSQGCPELEYMAVYVSDITNACLEHIGTHLRNLCDFRLVLLDREEKITDLPLDNGVRALLRGCNRLRRFALYLRPGGLTDVGLGYIGQYSPNVRWMLLGYVGETDRGLLEFSKGCPSLQKLEMRGCSFFSEYALAIAATRLTSLRYLWVQGYGASRSGRDLLAMARPFWNIELIPSRRVAMNDNAEVEHPAHILAYYSLAGPRKDFPDTVIPLDPAAYVRDEDN* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0989 609 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 28 601 - -
Ahy17g0989 609 PANTHER CORONATINE-INSENSITIVE PROTEIN 1 28 601 - -
Ahy17g0989 609 SUPERFAMILY RNI-like 106 537 - -
Ahy17g0989 609 Pfam Transport inhibitor response 1 protein domain 88 134 IPR041101 -
Ahy17g0989 609 MobiDBLite consensus disorder prediction 1 21 - -
Ahy17g0989 609 Pfam F-box 29 69 IPR041567 -
Ahy17g0989 609 SUPERFAMILY F-box domain 19 70 IPR036047 GO:0005515
Ahy17g0989 609 Gene3D Ribonuclease Inhibitor 68 602 IPR032675 -
Ahy17g0989 609 SMART LRR_CC_2 500 525 IPR006553 -
Ahy17g0989 609 SMART LRR_CC_2 330 353 IPR006553 -
Ahy17g0989 609 SMART LRR_CC_2 152 177 IPR006553 -
Ahy17g0989 609 SMART LRR_CC_2 354 377 IPR006553 -
Ahy17g0989 609 SMART LRR_CC_2 448 474 IPR006553 -
Ahy17g0989 609 Gene3D - 17 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0989 Ahy-Chr17 12443607 12448370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0989 K13463 - gmx:100793081 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0989 17 12443607 12448370 Ahy17g0989 17 12443607 12448370 ECH
Ahy17g0989 17 12443607 12448370 Ahy7g0814 7 10402271 10407037 hybridization
Ahy20g1473 20 41331368 41335019 Ahy17g0989 17 12443607 12448370 PCT
Ahy10g1083 10 27329978 27333603 Ahy17g0989 17 12443607 12448370 PCT
Ahy17g0989 17 12443607 12448370 Ahy20g1473 20 41331368 41335019 PCT
Ahy17g0989 17 12443607 12448370 Ahy10g1083 10 27329978 27333603 PCT