Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0890 ATGACAAACACAGAACCACACCCTCTCAATGACAATGCCGAACAAGAACTTGAAGAAGACGACGAACCAGAAGATGAAAAAGAACAAGAAGAAAACGAAGAAGAAGAAGACGTATTGCCGAATCTTCGAACCCCTCAGTCCGCAGCCTCGAAGCTCCACGAGCAGCGTTTCAAGGTCGAAACGCTGGCGCGGAGACTCTCGTCGGAGATGGTCCCAATCAGAGTCCACGATGTTCTTGTAAAAGGCAACACGAAGACCAAGGATTGGGTCATCGAAGCGGAGCTCAAGGGAATCGAGACTGCCACCACCATGCAGGACCTCATGCGTGCTTGCGAAGCCGCCATTGCCAGGCTCCAGGCTCTTGAAATCTTCGATTCTTGCAAGGTCAGGCTCGAGCCTGGTCCCAAAGAGCTTCCCAATACTGCAAACGTTGTCGTTGATGTAGTTGAGTCCAACAACACCGTTTCCGGCGAATGCGGCGTTTATACCAAACCCTCGACTAGTTCTTGGACTCTTGAGTGTGCTCTGAAGTACAAGAACTTGTTGGGTTATGGTGATATATGGGATACTTCTTTGGCATACGGTGGCAGCCAAGCAACAGAGTTGAGCTTAGGGGTCTATGCGCCTCGAATTAAGAAACTGTTGAGCCCTATTGTGGCACGGATATCATTGATTTCCCAAGATTGGCAGGAGTTTTCTTCGTATAAAGAACAGTTACTGGGTGCTTCTCTTGGATTGATCTCCACAAAGCACCATGACTTGGTTTACACTCTTGGGTGGCGCACATTGACAGATCCATCACAAACATCATCCAGGTCTATAAGGAGGCAGCTTGGGCACGGTTTACTTTCATCTTTGAAGTATACCTTTAAAATGGACAGGAGAAATTCACCTATTAGGCCTACAAGAGGCTATGCTTTTCTCTCTACCACCCATCTTGGTGGTCTTGCACCAGATAACCGGAGTTTGCGGTTTCTCCGTCAGGAATTTGATGTTCGTTTTGCTGTCCCCTTTGGGTTTTATAATACAGCATTGAACCTTGGGATTTCTGCCGGTGCTGTTTTTCCATGGGGACAAGGATTCATGAACAAGACATCTCCACTGCCAGAAAGGTTTTATTTGGGTGGTGACTTCTCCCCAGTTTGTACCTTAGGAGGACCAACAACATTATGGGGCTTTAAAACTAGGGGGTTAGGTCCTACTGAACCACGGAGGCAAAGTAGGGATAGAGCTGATGGTAACAACAGTGATTCCCCTGGATGGGATTTTATAGGAGGAGATCTTGCTGTTACTGCATTTGCAGACCTATCTTTTGATCTTCCAATCAAGTGGTTGAGAGAACATGGAATCCATGGACATGTTTTTGCTGGTTCGGGTAATGCTGCCAAATTAACTCAGAATGAATATAAGCAATTCTCTGCTCGAAAGTTTGTAGAATCCTTTCGAACATCGGTCGGGTGTGGAATTGTTATTCCCACACGACTCTTCCGCCTAGAGGGTAACTACTTTTACATACTCAGGAAGCATGAACATGATCGAGGCAAGACTGGTTTTAGGTTCAGCTTCTCAGCTCCTTCATAA 1581 0.4662 MTNTEPHPLNDNAEQELEEDDEPEDEKEQEENEEEEDVLPNLRTPQSAASKLHEQRFKVETLARRLSSEMVPIRVHDVLVKGNTKTKDWVIEAELKGIETATTMQDLMRACEAAIARLQALEIFDSCKVRLEPGPKELPNTANVVVDVVESNNTVSGECGVYTKPSTSSWTLECALKYKNLLGYGDIWDTSLAYGGSQATELSLGVYAPRIKKLLSPIVARISLISQDWQEFSSYKEQLLGASLGLISTKHHDLVYTLGWRTLTDPSQTSSRSIRRQLGHGLLSSLKYTFKMDRRNSPIRPTRGYAFLSTTHLGGLAPDNRSLRFLRQEFDVRFAVPFGFYNTALNLGISAGAVFPWGQGFMNKTSPLPERFYLGGDFSPVCTLGGPTTLWGFKTRGLGPTEPRRQSRDRADGNNSDSPGWDFIGGDLAVTAFADLSFDLPIKWLREHGIHGHVFAGSGNAAKLTQNEYKQFSARKFVESFRTSVGCGIVIPTRLFRLEGNYFYILRKHEHDRGKTGFRFSFSAPS* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0890 526 MobiDBLite consensus disorder prediction 395 418 - -
Ahy17g0890 526 PANTHER OUTER MEMBRANE OMP85 FAMILY PROTEIN 12 524 - -
Ahy17g0890 526 PANTHER SORTING AND ASSEMBLY MACHINERY SAMM50 PROTEIN FAMILY MEMBER 12 524 IPR039910 -
Ahy17g0890 526 MobiDBLite consensus disorder prediction 1 53 - -
Ahy17g0890 526 Gene3D membrane protein fhac 72 151 - -
Ahy17g0890 526 MobiDBLite consensus disorder prediction 14 37 - -
Ahy17g0890 526 Pfam Omp85 superfamily domain 180 523 IPR000184 GO:0019867
Ahy17g0890 526 Gene3D membrane protein fhac: a member of the omp85/tpsb transporter family 165 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0890 Ahy-Chr17 10330980 10334784 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0890 K07277 - gmx:100802876 862.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0890 17 10330980 10334784 Ahy17g0890 17 10330980 10334784 ECH
Ahy17g0890 17 10330980 10334784 Ahy7g0714 7 8133958 8137939 hybridization
Ahy20g1367 20 30195643 30201936 Ahy17g0890 17 10330980 10334784 PCT
Ahy17g0890 17 10330980 10334784 Ahy20g1367 20 30195643 30201936 PCT