Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3367 ATGGCGGTTTCGGAGGAAGAGTGTTCTTCCGCGAAGCCAGGACCGTCTTCGTATCCCTCCACGAAGCCCTACTATCTCTCTAAGTGCGTTCTCAGAGGCAGTGCCGTTCTTCAGGTTCTTTATGGTCACATCCGTTCACCTTCATCGAACGACGTAGTTTTCGGCAAGGAGACATCAATAGAATTGGTGGTCATTGGTGTGGATGGGATTGTACAATCAGTGTGTGATCAACCTGTTTTTGGCATAATCAAAGATCTTGCAATATTGCCATGGAATGCCAAATTCCAAATGCGGGATCCACAGATGTGGGGTAAAGATCTTTTGATTGCTTTATCCGATTCTGGGAAGCTTTCATTCCTCACATTTTGCAATGAAATGCACAGATTTTTCCCTGTAACACATGTTCATCTATCTAGTCCTGGAAACACAAGGGATCTCCCTGGAAGATTGCTAGCAGTTGATTCTAGTGGTTGTTTTGTTGCTGCCAGTGCATATGAAGATCGGTTGGCTCTATTTTCTGTGTCAGGGATTGGCAATGATATTGTTGATGAGAGGATAATGTATCCTACTGAAAGTGAAGGGACTGCAAGTATTTCTACAAGTAATCACAGAAGCACTTTAAGTGGTACTATTTGGAGCATGTGCTTTATTTCACAAGATTCCAAGCAAGCAAACAAGGAGCATAATCCTATACTAGCTGTTGTTCTAAATAGGAGGGGAAAACCTCAAAATGATTTGATACTGTTGGAATGGAATATTAAAGCATGTACAATCTCTGTCATTTCTCAGTTTGTTGAAGCTGAAGCTGGGTTTCTAGCACTTAACATTGTTGAAGTTCCTAACTCTCATGGACTTGCATTTCTATTCAGAGAAGGTGATGCTCTTTTGATGGATTTAAGAGACGCTTGCAACCCATGTTGCGTCTATAGGACTAACTTAAACTTTTTACCCAATGCCATGGAGGAGCAGACTTATATTGAGGACTCTTGTAAATTACAAGATGTTGACGATGAACGCTTTAATGTTGCTGCCTGTGCTTTGTTGGAGCTGAGTGATTATGATCCTATGTGCATAGACAATGACAGTGCCGGTACTAATCCAAGTTTCAAGTATGTATGCTCATGGAGTTGGGAACCTGAAAATAATAAAGATCCTAGGATGATCTTGTCTGTAAATACTGGAGAATTTTTTATGATTGAAATTCTTTTTGAATCTGATGGCCTTAAAGTTAGTATCTCTGAGTGTCTTTATAAAGGTATGCCTTGTAAAGCACTTTTGTGGGTTAAAGGTGGATATATAGCTGCCTTTATAGAAATGGGAGATGGCATGGTTCTGAAATTGGAAGATGGAAGGCTATGCTATACAAACCCTATTCAAAATATTACACCTATACTGGACATGGCAGTTGTGGATTATCATGATGAGAAACATGATCAAGTGTTTGCCTGCAGTGGTGAGGCACCTGAGGGGTCGTTAAGGATAATTCGGAGTGGTATCAGTGTAGACAAGCTAATTAGGACTGCTCCCATATATCAAGGGGTCTATGGTGCTTGGACTGTTCGAATGAAAATTACTGATTCATATCATTCTTTTCTAGTGCTATCATTTGTTGAGCAGACAAGAATATTGTCAGTTGGATTAAGTTTTACAGACGTGACTGATTCAGTTGGTTTCCAACCTAATGTATGTACCTTGGCATGTGGCCTTTTTAGTGATGGTCTGCTTGTCCAGATCCACAAATCTACTGTTAGGCTTTGTTTGCCTACCAAGGGTGCTCATGCTGAAGGTATATCCATGTCCTCTCCTATTTGCACATCTTGGTCTCCAGATAACATGACCATCAATTTGGGGGCAGTTGGGCACAATTTGATAGTTGTGTCAACCTCTAACCCATGCTTCTTGTTTATTCTAGGGGTAAGGTTGCTATCAGATTATCATTATGAAATTTATGAAATGCATCATTTAGGACTGCAGAATGAATTGTCATGCATTTCCATCCCTAGACAAAAAACTGAGCAGAAACAACCAATTTCATCTTCTTCTGCAAATAATAGAAGTACTTCTTCCCTTGTTAGTGGAGTTGACATCAATAAAACCTTTGTTATTGGCACACACAAGCCATCTGTTGAAATTTTGTCTTGTGCTCCTGATGGAGTTACGGTGGTTGCTTGTGGGACAATTTCATTAACAAATACAATGGGGACTACCTTAAGTGGCTGTGTACCTGAAGCTGTGCAGCTTGTATTTGTTGACAAGTATTATGTTCTTGCTGGATTGAGGAATGGAATGCTTCTTCGCTTTGAGTGGCCAACAAGATCATCTTCAATACCATTGACTCTGGTTAATGCTGATTTATGTTCCACAAATTTGGTGAATTCTGTGGCCAATGCTTTTGACAAGAGAAATGACCTGCCTTCCGTGCTTCAGTTGATTGCCATTCGTCGTATTGGTGTTACTCCAGTTTTCTTGGTGCCCTTGGATGACTCGCTTGATGCTGATATAATTGTTCTATGTGAGAGACCTTGGTTGTTGCATAGCGCAAGACACAGCCTTTCCTATACTTCTATTTCATTTCAGCCATCCACACATGTTACTCCTGTTTGCTCCATCGAGTTTCCTAAAGGAATACTATTTGTTGCAGAAAACAGTTTACATCTTGTGGAGATGATGCACAGTAAGAGACTTAATGCACAGAAGTTTCATTTAGAAGGCACTCTACGCAAGATCCTGTATCACAATGAAAGCAGGATGTTGCTTGTGTTGAGGACTGGACTGAATTATGGTACATGCTCGTCTGACATATGTTTTGTGGATCCCACAAGTGGGACAGTGCATTCATCTTTTAGACTCGAACCTGGAGAAACAGGAAAATCCATGGAAGTAGTAAGGGTTGGAAGTGAGCAGGCTCTTGTAGTTGGAACTAGTCTGTCTTCTGGTCCGGCCATAATGCCCAGTGGGGAAGCTGAGAGTGCTAGGGGTCGCCTTCTTGTTCTTTGCCTTGATCATGTGCAAAATTCAGATAGTGGTTCAATGACATTATGTTCAAAGGCAGGATCATCATCTCTACGAACTTCACCATTTCATGAAACTGTTACATATGCTCCCGAACAGTTATCAGGCAGCAGTCTTGGCAGCAGCCCCGATGATAATAGTTCCGATGGGATCAAACTAGATGAAAATGAAGTATGGCAGTTCCGGTTTGCTTATGGCAATACATGGCAGGGAATGGTGCTTGCAATCTGTCCTTATCTTGATCGTTACTTCCTGGCATCAGCTGGCAATACTTTTTATGTTTGTGGTTTCCCAAATGACAATCCCCAAAGAGTGAGAAAGTTTGCGCAGGGAAGGACACGTTTCTTGGTAACATCATTGACTGTACATTTCACTAGAATCGCTGTTGGTGATTGTCGTGATGGTGTCCTTTTCTATTCCTACCACGAGGATACAAAAAAATTGGAGCAACTTTACTCTGACCCATCGCTGAGGTTAGTTGCTGATTGCATTCTTATGGATGCTGAAACGGCTGTCGTTTCGGATCGTAAAGGAAGCATTGCTGTTTTATGTTCAGATCATTTGGAAGATAATGCAAGTCCAGAATGCAATTTGTCACTAAATTGTGCTTATTTCATGGGTGAAATAGCCATGAGCATTCAGAAGGGTTCATATTCATACCGTCTTCCAGCTGATGATGCTCTGCAAGGAGCCAATTGGCCCAAGACAAACATTGATTCACTACAAAATACAATTATTGCTAGTACTCTGTTAGGAAGCATCATGATCTTCATCCCTTTATCAAGGGAAGAATATGAGCTCTTAGAAGCAGTGCAAACAAGACTTGCTGTACATCATTTGACTGCACCTATTCTTGGGAACGATCATAATGAGTTTCGCAGCCGTGAAAATCCAGCCGGAACACCCAAAATACTTGACGGTGATATGTTGACTCAGTTTCTGGAGTTGACAAGCATGCAACAACAGATCATTTTATCATCCGACCCACCGGAAATGGTAAAATCAAGTTTGAAGTCACTCCTACCTCCACATGTTCCTATTAATCAGGTTGTTCAACTTCTTGAACGAGTTCATTATGCGCTGAACTAA 4101 0.4119 MAVSEEECSSAKPGPSSYPSTKPYYLSKCVLRGSAVLQVLYGHIRSPSSNDVVFGKETSIELVVIGVDGIVQSVCDQPVFGIIKDLAILPWNAKFQMRDPQMWGKDLLIALSDSGKLSFLTFCNEMHRFFPVTHVHLSSPGNTRDLPGRLLAVDSSGCFVAASAYEDRLALFSVSGIGNDIVDERIMYPTESEGTASISTSNHRSTLSGTIWSMCFISQDSKQANKEHNPILAVVLNRRGKPQNDLILLEWNIKACTISVISQFVEAEAGFLALNIVEVPNSHGLAFLFREGDALLMDLRDACNPCCVYRTNLNFLPNAMEEQTYIEDSCKLQDVDDERFNVAACALLELSDYDPMCIDNDSAGTNPSFKYVCSWSWEPENNKDPRMILSVNTGEFFMIEILFESDGLKVSISECLYKGMPCKALLWVKGGYIAAFIEMGDGMVLKLEDGRLCYTNPIQNITPILDMAVVDYHDEKHDQVFACSGEAPEGSLRIIRSGISVDKLIRTAPIYQGVYGAWTVRMKITDSYHSFLVLSFVEQTRILSVGLSFTDVTDSVGFQPNVCTLACGLFSDGLLVQIHKSTVRLCLPTKGAHAEGISMSSPICTSWSPDNMTINLGAVGHNLIVVSTSNPCFLFILGVRLLSDYHYEIYEMHHLGLQNELSCISIPRQKTEQKQPISSSSANNRSTSSLVSGVDINKTFVIGTHKPSVEILSCAPDGVTVVACGTISLTNTMGTTLSGCVPEAVQLVFVDKYYVLAGLRNGMLLRFEWPTRSSSIPLTLVNADLCSTNLVNSVANAFDKRNDLPSVLQLIAIRRIGVTPVFLVPLDDSLDADIIVLCERPWLLHSARHSLSYTSISFQPSTHVTPVCSIEFPKGILFVAENSLHLVEMMHSKRLNAQKFHLEGTLRKILYHNESRMLLVLRTGLNYGTCSSDICFVDPTSGTVHSSFRLEPGETGKSMEVVRVGSEQALVVGTSLSSGPAIMPSGEAESARGRLLVLCLDHVQNSDSGSMTLCSKAGSSSLRTSPFHETVTYAPEQLSGSSLGSSPDDNSSDGIKLDENEVWQFRFAYGNTWQGMVLAICPYLDRYFLASAGNTFYVCGFPNDNPQRVRKFAQGRTRFLVTSLTVHFTRIAVGDCRDGVLFYSYHEDTKKLEQLYSDPSLRLVADCILMDAETAVVSDRKGSIAVLCSDHLEDNASPECNLSLNCAYFMGEIAMSIQKGSYSYRLPADDALQGANWPKTNIDSLQNTIIASTLLGSIMIFIPLSREEYELLEAVQTRLAVHHLTAPILGNDHNEFRSRENPAGTPKILDGDMLTQFLELTSMQQQIILSSDPPEMVKSSLKSLLPPHVPINQVVQLLERVHYALN* 1367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3367 1366 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (CPSF) A SUBUNIT PROTEIN 19 1363 - -
Ahy16g3367 1366 Gene3D - 499 894 IPR015943 GO:0005515
Ahy16g3367 1366 Gene3D - 35 461 IPR015943 GO:0005515
Ahy16g3367 1366 Pfam CPSF A subunit region 1065 1319 IPR004871 GO:0003676|GO:0005634
Ahy16g3367 1366 Gene3D - 1072 1238 IPR015943 GO:0005515
Ahy16g3367 1366 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 19 1363 - -
Ahy16g3367 1366 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 106 666 IPR018846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3367 Ahy-Chr16 150593254 150603283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3367 K12830 - gmx:100806799 2143.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3367 16 150593254 150603283 Ahy16g3367 16 150593254 150603283 ECH
Ahy16g3367 16 150593254 150603283 Ahy6g0792 6 9990386 10000957 hybridization