Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3347 ATGGATTCGGAAACTAGCACCGATTCGGCAAAATGTTGCCAGTGCTGGAACTGCATCTGCGGCTGCGATTGCTCTGTGGCGGCGACACTTCAATCTTCGCGAAGCACGAAGCGGAGGTATGATTCTCGACCTGCATCGCCGGAATCAGTCGCCAAGGTTGAAACATTGGACGAATGCAGCGCACTGCGGGAGGCTCTTAGCCGGCAGCAGCAGGCGGTGAAAGATTTGGCGGCTGAATTGGAGGAGGAGAGGAACGCGGCGTCGTCGGCGGCGAACGAGGCAATGTCGATGATACTGAGACTGCAGAAGGAGAAGGCGGAGGTTCAGATGGAGGCGAGGCAGTTCAAGCGCATCGTGGAGGAGAGAAGCTCTCATGATCAGAAAGAATTGTTGGAATTGGAGGATTTGTTGTATAAAAGGGAACAAACAATTCAATCTCTGAATTGTGAGGTTCAGGCTTATAAGCACAGATTAATGAGTTTTGGCCTCACAGAATCTGAGGCAGATTGTGAAGAATTCCAGGTTGCCTCTTTTGATTATCCTCAATTGAAATGCAATATACTGAATTCCACTGCCAATGCTGATAACAATGATGCTGATGTTGAGAAGTATATATTTGGGGAAACTCCTAGAGATCGTTTGAGGAATTTGGAGAATAGGATCTCTCAGATGGAGAGGAGTCCCACCTATAGCCAGATGGAAGGGGATTTTCCAGGCAAGAATTTCCTAGAGAAGGTGGTAGTTGGACAGTCGCCGCGACGATCCAGAAGGAAGTATTCCTTTGATTCGGCTTCATTTGGCCCCGAGCTTCTGATGGATTCTCCAAAGATCACTGGTGGTAACTTTAGCAAGATAGAGGAGGAGCCATTTTCCAATTTGAAGAAGGTAGAGAATAATGCATCAGAAGCAGGTGATGAAATATATGACAAGGTTTACACAGTTGACTCTGGTTACAATTGTTTCAATCAGTTTAAAGGTGCTCTTTATGATGATTTTCCTGTAACCACTCCAAGAGATTTTGGGAATAACATTCATGGTGATTTTGAAGATCCTTACATTAAGAAACTTTACATGAGGCTTCAGGCACTTGAGGCTGACAGGGAATCAATGAGGCAAGCAATCATTTCAATGCGCACTGATAAAGCACAGCTTGTGCTGCTGAAGGAGATAGCTCAACAGCTGTGCAAGGAAATGTCACCACAGAGAAAAAGGACAGCAAGAAAGTCAGCTATGGCTCCATTTTCCTCGGTTTTTAAGTGGGTCGTATCAATTGTTTTCTGGAGGAAGAAATCTCATGAGATCAGGTATATATTCGGGGTACCATCTGAGAGTGTTGGATTGCTAATGCTAATTAACAAGGAACCACGTGTAAAGTCATGGCGATATATTGCAAGAACACAATTGGAAGATTAA 1413 0.4501 MDSETSTDSAKCCQCWNCICGCDCSVAATLQSSRSTKRRYDSRPASPESVAKVETLDECSALREALSRQQQAVKDLAAELEEERNAASSAANEAMSMILRLQKEKAEVQMEARQFKRIVEERSSHDQKELLELEDLLYKREQTIQSLNCEVQAYKHRLMSFGLTESEADCEEFQVASFDYPQLKCNILNSTANADNNDADVEKYIFGETPRDRLRNLENRISQMERSPTYSQMEGDFPGKNFLEKVVVGQSPRRSRRKYSFDSASFGPELLMDSPKITGGNFSKIEEEPFSNLKKVENNASEAGDEIYDKVYTVDSGYNCFNQFKGALYDDFPVTTPRDFGNNIHGDFEDPYIKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLKEIAQQLCKEMSPQRKRTARKSAMAPFSSVFKWVVSIVFWRKKSHEIRYIFGVPSESVGLLMLINKEPRVKSWRYIARTQLED* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3347 470 Coils Coil 353 380 - -
Ahy16g3347 470 PANTHER BNAANNG28530D PROTEIN 1 443 - -
Ahy16g3347 470 Pfam Zein-binding 61 151 IPR007656 -
Ahy16g3347 470 Coils Coil 59 118 - -
Ahy16g3347 470 ProSiteProfiles GTD-binding domain profile. 57 155 IPR007656 -
Ahy16g3347 470 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3347 Ahy-Chr16 150414850 150417115 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g3347 - - gmx:100797605 524.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3347 16 150414850 150417115 Ahy16g3347 16 150414850 150417115 ECH
Ahy16g3347 16 150414850 150417115 Ahy6g0809 6 10136595 10138851 hybridization
Ahy16g3347 16 150414850 150417115 Ahy12g2798 12 117632100 117636295 PCT
Ahy16g3347 16 150414850 150417115 Ahy2g2391 2 100078157 100082356 PCT
Ahy12g2798 12 117632100 117636295 Ahy16g3347 16 150414850 150417115 PCT
Ahy2g2391 2 100078157 100082356 Ahy16g3347 16 150414850 150417115 PCT