Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy12g2798 ATGGCTTCGAAGGTAGTTTCGTCTTCCAAGGATTTGATAAAATGCTGCAACTGCGGTTGTAGTTGCTCTTTGGAAGGTGAACCTGCAGGGACTTGGATTCGCTCTGTTAAACGGAAGCATGATGAGTTTGAGCAGGGTACCAATTTTGTTGTCCCTGGGTTGGATTTGGATGTTTCGGTTGTGCGAGTTGAAATCGAGAACGAGGTTGCTGCATTACGTGAGGCAATTATCAGTCAGCAGAAGACCATAAAAGACTTGAATGCTGAGTTGGAGGAAGAGAGGAGCTCTTCTTCGACCGCTGCCAATGAGACCATGTCTATGATATTGAGGTTGCAAAGGGAGAAGGCAGAGATTCAGATGGAAGCCCGGCAATTCAAGCGTTATGCGGAGGAGAAGATGCAACATGATCAGGAGGAGATTTTAGCATTGGATGATTTGTTGTATAAGAAAGAACAGACGATTGAGTCGCTGACTTGTGAAATTCAGGCATATAAGCACAGGATGATGAGTTTTGGGCTCACTGAGGCCGAGGCAGATGGCAATTTACTATATGATCTTCCAGCCTATGAATACCCTCCTTTGAAATGCAATGCGAGGAATGCTGGCATGGATGCTGATAATGATGACACCGATATTGAAAAGTATGCATTTGGTGAAACTCCTAGGGACCGGTTGAGGAACATAGAAGATAGGATTTCCGAAATGGAGAGAACACCCACTTACAAAGAGCTCGATGCGGATTTTACAGGGAGAAATACTCTAGAGAAGACTTCACATTTTAGGAAAACTTCCACCGACTCAGTGGGTAGAGAAGCAGGTTCTGGGTATTTGTCAGATTCTCCGAAGGTCAATAGTAACTTTAGGAGAGACTATTTCTCACAATCCGAGGACCAGTCCAACTTGAAGAAAGATAATGCATCAGAAGCCGATGATACCACTGACAGAATATATACCATTGACTCGGTTCACAGTCGGGCACCTCATAATGGTTTCACAGGGTCCAAAGCTGGAGGAGCTGCTTTAGAAGATTATACTGGCTCGCCAAGGGAATCAAGGAATCATGAGGAATATGAGGATCCCTACGTTAAGAAGCTTTATATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCGATGAGGCAGGCACTCATTTCAATGCGCACAGATAAAGCACAACTTGTGTTACTGAAGGAAATAGCTCAACAACTGTGCAAGGACATGTCACCACAACGAAAAATGACAAATAGGAGGTCAGCTATCGGTGGAAGATCGTCACTCGCGTCAATTGTGAAGTGGATCTCATCAGTTGTTATGTGGAGAAAGAGAGCTCATCAAAGCAAGTATGGATTTGGGCTACCAGCTGATAGCACAGGCTTGTTGATGCTCCTGGACAAGGGTATAACACACACAAGGCCATGGAGATGTATTTCAAGAACACAAGTGGGAAACTAA 1452 0.4463 MASKVVSSSKDLIKCCNCGCSCSLEGEPAGTWIRSVKRKHDEFEQGTNFVVPGLDLDVSVVRVEIENEVAALREAIISQQKTIKDLNAELEEERSSSSTAANETMSMILRLQREKAEIQMEARQFKRYAEEKMQHDQEEILALDDLLYKKEQTIESLTCEIQAYKHRMMSFGLTEAEADGNLLYDLPAYEYPPLKCNARNAGMDADNDDTDIEKYAFGETPRDRLRNIEDRISEMERTPTYKELDADFTGRNTLEKTSHFRKTSTDSVGREAGSGYLSDSPKVNSNFRRDYFSQSEDQSNLKKDNASEADDTTDRIYTIDSVHSRAPHNGFTGSKAGGAALEDYTGSPRESRNHEEYEDPYVKKLYMRLQALEADRESMRQALISMRTDKAQLVLLKEIAQQLCKDMSPQRKMTNRRSAIGGRSSLASIVKWISSVVMWRKRAHQSKYGFGLPADSTGLLMLLDKGITHTRPWRCISRTQVGN* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy12g2798 483 Coils Coil 362 389 - -
Ahy12g2798 483 MobiDBLite consensus disorder prediction 255 356 - -
Ahy12g2798 483 PANTHER BNAANNG28530D PROTEIN 7 457 - -
Ahy12g2798 483 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 7 457 - -
Ahy12g2798 483 Coils Coil 62 103 - -
Ahy12g2798 483 MobiDBLite consensus disorder prediction 295 318 - -
Ahy12g2798 483 ProSiteProfiles GTD-binding domain profile. 67 165 IPR007656 -
Ahy12g2798 483 Coils Coil 111 131 - -
Ahy12g2798 483 MobiDBLite consensus disorder prediction 278 294 - -
Ahy12g2798 483 Pfam Zein-binding 71 161 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy12g2798 Ahy-Chr12 117632100 117636295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy12g2798 - - aprc:113872114 676.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy12g2798 12 117632100 117636295 Ahy12g2798 12 117632100 117636295 ECH
Ahy12g2798 12 117632100 117636295 Ahy2g2391 2 100078157 100082356 hybridization
Ahy16g3347 16 150414850 150417115 Ahy12g2798 12 117632100 117636295 PCT
Ahy6g0809 6 10136595 10138851 Ahy12g2798 12 117632100 117636295 PCT
Ahy12g2798 12 117632100 117636295 Ahy16g3347 16 150414850 150417115 PCT
Ahy12g2798 12 117632100 117636295 Ahy6g0809 6 10136595 10138851 PCT