Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2845 ATGGTGAATTCTATGGTGGAACGCGCCACGAGCGACATGCTCATCGGACCCGATTGGGCCATGAACATCGAGATCTGTGACATGCTCAATCGTGACCCTGGGCAAGCAAAGGATATTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAAAACTCAAAAGTCCAGCTACTTGCTCTAACTTTACTGGAGACAATCATAAAGAACTGCGGAGACATTGTTCACATGCATGTTGCAGAGAAAGATGTGCTTCATGAGATGGTGAAAATAGCAAAGAAGAAGCCTGATTTTCATGTCAAAGAGAAGATACTGATTCTTGTAGATACATGGCAAGAAGCCTTTGGAGGTCCCCGATCAAGATATCCGCAGTATTATGCTGCATACCAGGAACTGCTGCGTGCTGGGGCAGTATTTCCCCAGAGATCTGAGCAATCTGCACCGGTGTTCACACCTCCACAAACACAGCCATTAGCATCATACCCTCCAAACATACGTGACTCTGATACTCGGCAGGACACAGCTGGTTCCTCTGCAGAGTCCGAGTTCCCAACATTAACTCTGACCGAAATTCAGAATGCACGGGGTATTATGGATGTTCTCTCAGAAATGCTAAATGCATTAGACCCTAGTAATAAAGAAGGTCTTAGGCAGGAGGTTATTGTTGACTTGGTGGAGCAGTGTCGAACATACAAACAGAGAGTGGTACACCTTGTTAACTCAACTTCTGATGAATCACTGCTTTGCCAAGGACTAGCTCTGAATGATGATCTGCAGCGTGTACTTGCCAAGCATGAATCTATTTTGTCAGGAACTCCTACTCAGAATCAAAAACCCCCAGAGAATTCAAAGCCTGCAACTGCTGGAGCACTTCTAGATGTTGATGCTCCTTTGGTTGATACTGGAAATTCTAGCAAACAAATTGATAGAAGCTCCCCTCCTAGTGCTGAAGCAGGATCCTCAACATTGAATCAGTTATTGCTTCCTGCACCCCCCACAGCCAATGGTTCAACCATCCCTGCCAAGGTTGATCCCAAATTCGACCTGCTCAGTGGTGATGACTATGCCTCACCAAAAGCAGATACTTCACTTGCTCTTGTTTCTCTTGGAGAACAACAGCCTGCTACTCCTGTGAATCAGCAGAACGCCCTTGTTCCTTTTGATGTATTTTCTAATGGTAATAATGCAGCAGCTACACCTGTCAGTACTCAGCTAAACCAGCCACCTAATTTTGCTGGCCAAACGAGTCAGATTCCTACCCAATTTCAACAACAGCAGAGTTTTGTATCTCAAGGTGGATTTTACCCCCAAGGAAGTGCACCAAACGCAGGGTCACCTCAGTATGAGCAGTCACTTTATACACAAAGTTCAGGTCCCGCCTGGAATGGTCAGGTTGCACAGCAGCCACAGCCATCTTCGCCTGTTTATGGCACACAAAACACTGGATCACTGCCGCCCCCTCCCTGGGAAGCTCAAGCGGCAGATAATGGCAGTCCAGCTGCAAGCACTCCATTTCCGCAACCACCACAAGTTAGTCAAGTGATGATGACAAATGGCGCCGCAAATTCTCAGGGCCCTCAAACAATGGGCAATGGCCAGGTTGCTGGAATATATATGCAGCCAACTGCCAACAGTTATACGCCAGCAATCAATAACCATGTTGGTCAACACAATCAATTCGGCATGCATCCTCAACATATTCAAGGCATGGCAGGGCCCTACATGGGTGGTATGATGCCAAATCAAATGCAAGCTGGTCCAGTGGCTTCCATGTATCCTCAACAAATGTACGGTAATCAATTTATGGGATATGGCTACGGTCAGCAACAAGGAGTTCCATATATTGAGCAGCAAATGTATGGTTTATCTGTTAGAGATGATGGTGGTTTAAGAAGCTCTTACCAGTCTTCTACTATATCTTATGCTCCATCTGGGAAGCCTTCCAAGCCAGAAGATAAGCTATTTGGTGACCTTGTTGACATGGCAAAGGTGAAGCCAAAACCTGCTCCAGGTCGAGCTGGTAGCATGTAA 2025 0.4612 MVNSMVERATSDMLIGPDWAMNIEICDMLNRDPGQAKDIVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAEKDVLHEMVKIAKKKPDFHVKEKILILVDTWQEAFGGPRSRYPQYYAAYQELLRAGAVFPQRSEQSAPVFTPPQTQPLASYPPNIRDSDTRQDTAGSSAESEFPTLTLTEIQNARGIMDVLSEMLNALDPSNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDESLLCQGLALNDDLQRVLAKHESILSGTPTQNQKPPENSKPATAGALLDVDAPLVDTGNSSKQIDRSSPPSAEAGSSTLNQLLLPAPPTANGSTIPAKVDPKFDLLSGDDYASPKADTSLALVSLGEQQPATPVNQQNALVPFDVFSNGNNAAATPVSTQLNQPPNFAGQTSQIPTQFQQQQSFVSQGGFYPQGSAPNAGSPQYEQSLYTQSSGPAWNGQVAQQPQPSSPVYGTQNTGSLPPPPWEAQAADNGSPAASTPFPQPPQVSQVMMTNGAANSQGPQTMGNGQVAGIYMQPTANSYTPAINNHVGQHNQFGMHPQHIQGMAGPYMGGMMPNQMQAGPVASMYPQQMYGNQFMGYGYGQQQGVPYIEQQMYGLSVRDDGGLRSSYQSSTISYAPSGKPSKPEDKLFGDLVDMAKVKPKPAPGRAGSM* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2845 674 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Ahy16g2845 674 Pfam VHS domain 3 130 IPR002014 GO:0035091|GO:0043130
Ahy16g2845 674 MobiDBLite consensus disorder prediction 142 179 - -
Ahy16g2845 674 MobiDBLite consensus disorder prediction 494 510 - -
Ahy16g2845 674 PANTHER TOM1-LIKE PROTEIN 1 668 IPR044836 GO:0035091|GO:0043130|GO:0043328
Ahy16g2845 674 MobiDBLite consensus disorder prediction 266 285 - -
Ahy16g2845 674 MobiDBLite consensus disorder prediction 296 318 - -
Ahy16g2845 674 MobiDBLite consensus disorder prediction 396 510 - -
Ahy16g2845 674 MobiDBLite consensus disorder prediction 632 653 - -
Ahy16g2845 674 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Ahy16g2845 674 CDD VHS 2 132 - -
Ahy16g2845 674 CDD GAT_GGA_like_plant 188 266 - -
Ahy16g2845 674 Gene3D - 183 275 IPR038425 -
Ahy16g2845 674 Gene3D - 1 148 IPR008942 -
Ahy16g2845 674 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Ahy16g2845 674 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Ahy16g2845 674 MobiDBLite consensus disorder prediction 298 318 - -
Ahy16g2845 674 PANTHER TARGET OF MYB PROTEIN 1 1 668 - -
Ahy16g2845 674 Pfam GAT domain 194 269 IPR004152 GO:0035091|GO:0043130
Ahy16g2845 674 SUPERFAMILY GAT-like domain 141 269 - -
Ahy16g2845 674 MobiDBLite consensus disorder prediction 396 484 - -
Ahy16g2845 674 MobiDBLite consensus disorder prediction 266 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2845 Ahy-Chr16 142277321 142284400 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2845 - - gmx:100809022 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2845 16 142277321 142284400 Ahy17g2729 17 125392957 125397833 PCT
Ahy16g2845 16 142277321 142284400 Ahy8g0473 8 9575357 9580278 PCT
Ahy17g2729 17 125392957 125397833 Ahy16g2845 16 142277321 142284400 PCT
Ahy8g0473 8 9575357 9580278 Ahy16g2845 16 142277321 142284400 PCT