Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2277 ATGGGAAAGTTGGGGCCTTTGATCTTAGTGGCTCTGTTATCGTTTCTGTGGTGCTGCCATGCCGTTGTGGAAGGGCTGGGTGTGAATTGGGGAACGCAAGCAACGCACAAGTTGCCACCGGACACGGTGGTGCAGATGCTGAAGGACAATGGGATTCAGAAGGTGAAGCTGTTCGATGCAGAAGAATCAACAATGAGTGCTCTTGCTGGCACTGGAATCGAGGTCATGGTTGCCATACCTAACATCCAGCTTGCTGATATGAATGACAATGATAAAGCCAAACAGTGGGTTAAGAAGAGTGTTACAAAGTACAACTTCAATGGCGGTGTTAACATCAAGTATGTAGCTGTTGGGAACGAGCCATTTTTGAAATCATACAATAATTCATTCTTGAATGTCACATTCCCTGCACTACAAAACATTCAAAATGCACTTAATGAAGCTGGTGTTGGTGATAAGATTAAGGCTACAGTGCCCTTAAATGCTGATGTTTATGAGTCTCCGGCAAACAATCCTGTTCCGTCTTCTGGAACATTCCGGGCTGATATCAATGACCTAATGACCCAGATAGTAGCTTTCCTCAGCAAGAATGGTGCACCATTTACAGTGAACATTTACCCTTTCTTGAGTCTCTATGGGCATGACGATTTCCCTTTTGATTATGCCTTCTTTGATGGTGTCACCAACCCCATAAACGATAACGGGACACCGTACACCAATGTCTTCGATGCGAATTTTGATACCCTTGTTGCCGCTCTCAGCAAAGCAGGGTACGGAGACCTGCCCATAATTGTTGGAGAAGTTGGATGGCCTACTGACGGCGACAAGAACGCCAACACGCGTAATGCTTTGAGGTTCTACAATGGACTCCTGCCAAGGCTTGCAGCCAACAAAGGGACACCCCGCCGCCCTGGATACATCGAAGTCTATCTGTTCGGGCTCCTTGATGAGAATGGAAAGAGCATTCAGCCAGGGAACTTCGAGCGTCACTGGGGGATTTTCGGGTATGATGGGCAGCCTAAGTTCCCGATGGACCTTTCCGGCCAGAATCAGAACAAGATGCTCGTTGGTGCGAAAAATGTACAGTACCTCGAACAAGAATGGTGCATGTTTAATCCTAATGCTAAAGATCTCAGCAAGCTCGGGGAAAGTATCACTTATGCCTGCACCAATGGGGATTGCACTGCACTTGGCTATGGATCTTCATGCAACAATTTGGATGCTAATGGGAATGCTTCATATGCATTTAACATGTATTTTCAGATGCAAAATCAGAACCTTCAAGCCTGCAATTTTGGAGGTTTGGCGAAGCTTTCGTTGACAAACATTTCAACCGACACCTGCAATTTTCCCATTCAGATAAAGTCTTCATCACCACCCTCTTTGATGGTTCCCTCTCTCTTGGCTTCTTTATTGGTTGCTTTACCGGTGGTTCTGTTTATGTAG 1446 0.4592 MGKLGPLILVALLSFLWCCHAVVEGLGVNWGTQATHKLPPDTVVQMLKDNGIQKVKLFDAEESTMSALAGTGIEVMVAIPNIQLADMNDNDKAKQWVKKSVTKYNFNGGVNIKYVAVGNEPFLKSYNNSFLNVTFPALQNIQNALNEAGVGDKIKATVPLNADVYESPANNPVPSSGTFRADINDLMTQIVAFLSKNGAPFTVNIYPFLSLYGHDDFPFDYAFFDGVTNPINDNGTPYTNVFDANFDTLVAALSKAGYGDLPIIVGEVGWPTDGDKNANTRNALRFYNGLLPRLAANKGTPRRPGYIEVYLFGLLDENGKSIQPGNFERHWGIFGYDGQPKFPMDLSGQNQNKMLVGAKNVQYLEQEWCMFNPNAKDLSKLGESITYACTNGDCTALGYGSSCNNLDANGNASYAFNMYFQMQNQNLQACNFGGLAKLSLTNISTDTCNFPIQIKSSSPPSLMVPSLLASLLVALPVVLFM* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2277 481 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
Ahy16g2277 481 Pfam X8 domain 368 436 IPR012946 -
Ahy16g2277 481 Gene3D Glycosidases 25 354 - -
Ahy16g2277 481 Gene3D - 362 458 - -
Ahy16g2277 481 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 13 468 IPR044965 GO:0004553|GO:0005975
Ahy16g2277 481 SUPERFAMILY (Trans)glycosidases 26 345 IPR017853 -
Ahy16g2277 481 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 13 468 - -
Ahy16g2277 481 SMART X8_cls 367 450 IPR012946 -
Ahy16g2277 481 Pfam Glycosyl hydrolases family 17 26 345 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2277 Ahy-Chr16 125888663 125892348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2277 8 454 Miscellaneous Gene Families AT2G19440 71.588 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2277 - - gmx:100815300 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2277 16 125888663 125892348 Ahy16g2277 16 125888663 125892348 ECH
Ahy16g2277 16 125888663 125892348 Ahy6g1946 6 94918860 94922634 hybridization
Ahy16g2277 16 125888663 125892348 Ahy20g3052 20 141199336 141201914 PCT
Ahy16g2277 16 125888663 125892348 Ahy10g2489 10 114410619 114413538 PCT
Ahy20g3052 20 141199336 141201914 Ahy16g2277 16 125888663 125892348 PCT
Ahy10g2489 10 114410619 114413538 Ahy16g2277 16 125888663 125892348 PCT