Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g2259 ATGAATGCATTAGTAGCTACCAACAGGAACTTTAAGTTGGCCTCTAGGCTTCTTGGATTGGACTCAAAGCTTGAGAAAAGTTTATTGATTCCATTCAGGGAAATCAAGGTTGAATGCACCATACCTAAAGATGATGGCACATTAGCATCATATGTTGGGTTCAGGGTTCAACATGACAATGCTAGAGGCCCTATGAAAGGAGGAATCAGATACCATCCTGAGGTTGATCCAGATGAAGTGAATGCTTTAGCACAACTAATGACATGGAAAACTGCGGTAGCAAATATACCATATGGTGGCGCCAAAGGAGGAATAGGGTGTAACCCATCAGAACTAAGTGTTTCTGAGTTAGAAAGGCTAACTAGAGTTTTCACACAGAAAATCCATGATTTGATTGGAACTCATACTGATGTGCCTGCACCCGATATGGGAACAGGACCACAGACAATGGCATGGATACTAGATGAGTATTCGAAATTTCATGGTTATTCTCCTGCAGTTGTGACTGGAAAACCGATAGATCTTGGTGGATCTCTAGGCAGAGAAGCAGCCACAGGAAGAGGAGTCCTCTATGCAACAGAGGCTGTGCTTAATGAGTATGGGAAGAATGTATCTGGACATCGGTTTGTCATACAGGGTTTCGGAAATGTGGGATCTTGGGCTGCCCAATTAATTAGCGAGAGAGGTGGAAAGGTTATTGCTGTGAGTGATGTAACTGGAGCCATAAAGAACAACAATGGCCTTGATATCCCAAGCTTACTCAAGCATTCCAAAGAGCATAAAGGAGTTAAAGGATTCCATGGTGGTGATTCCATTGATCCTAAGTCAATATTAGTTGAAGACTGTGATGTTCTGCTTCCAGCAGCTCTTGGGGGTGTCATTAATAGGGAAAATGCAAATGAAATCAAAGCCAAATTTATTATTGAAGCAGCCAATCACCCCACTGACCCAGAGGCTGATGAGATTCTGAAGAAGAAAGGAGTTGTGATCCTTCCAGACATATATGCAAATTCAGGAGGTGTTACAGTTAGTTACTTTGAGTGGGTTCAGAACATCCAAGGGTTCATGTGGGATGAAGAGAAAGTGAACAATGAGCTAAAGAAGTACATGACAAGAGGGTTCAAAGATGTGAAAGAAATGTGCAAGACTCATGAATGCGATCTTCGAATGGGAGCCTTCACTCTTGCAGTTAACCGTGTTGCAAGGGCCACTGTCCTTAGGGGTTGGGAAGCTTGA 1236 0.4288 MNALVATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCNPSELSVSELERLTRVFTQKIHDLIGTHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGREAATGRGVLYATEAVLNEYGKNVSGHRFVIQGFGNVGSWAAQLISERGGKVIAVSDVTGAIKNNNGLDIPSLLKHSKEHKGVKGFHGGDSIDPKSILVEDCDVLLPAALGGVINRENANEIKAKFIIEAANHPTDPEADEILKKKGVVILPDIYANSGGVTVSYFEWVQNIQGFMWDEEKVNNELKKYMTRGFKDVKEMCKTHECDLRMGAFTLAVNRVARATVLRGWEA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g2259 411 SMART ELFV_dehydrog_3 178 408 IPR006096 GO:0006520|GO:0016491
Ahy16g2259 411 Gene3D Leucine Dehydrogenase, chain A, domain 1 33 175 - -
Ahy16g2259 411 CDD NAD_bind_1_Glu_DH 176 402 IPR033922 GO:0016639
Ahy16g2259 411 PANTHER BNAA05G37230D PROTEIN 1 405 - -
Ahy16g2259 411 Gene3D - 176 410 - -
Ahy16g2259 411 ProSitePatterns Glu / Leu / Phe / Val dehydrogenases active site. 96 109 IPR033524 -
Ahy16g2259 411 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 6 178 IPR046346 -
Ahy16g2259 411 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 176 409 IPR036291 -
Ahy16g2259 411 PIRSF Glu_DH 1 411 IPR014362 GO:0016639
Ahy16g2259 411 PANTHER GLUTAMATE DEHYDROGENASE 1 405 - -
Ahy16g2259 411 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 33 159 IPR006097 GO:0006520|GO:0016491
Ahy16g2259 411 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 88 102 IPR006095 GO:0006520|GO:0016491
Ahy16g2259 411 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 336 347 IPR006095 GO:0006520|GO:0016491
Ahy16g2259 411 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 167 189 IPR006095 GO:0006520|GO:0016491
Ahy16g2259 411 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 209 229 IPR006095 GO:0006520|GO:0016491
Ahy16g2259 411 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 176 408 IPR006096 GO:0006520|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g2259 Ahy-Chr16 125290937 125297609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g2259 1 296 EF-hand Containing Proteins AT5G07440 78.378 8.07e-179 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g2259 K00261 - gmx:100789509 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g2259 16 125290937 125297609 Ahy16g2259 16 125290937 125297609 ECH
Ahy16g2259 16 125290937 125297609 Ahy6g1931 6 94487974 94494526 hybridization
Ahy16g2259 16 125290937 125297609 Ahy20g3046 20 141168211 141172058 PCT
Ahy16g2259 16 125290937 125297609 Ahy10g2483 10 114388201 114391372 PCT
Ahy20g3046 20 141168211 141172058 Ahy16g2259 16 125290937 125297609 PCT
Ahy10g2483 10 114388201 114391372 Ahy16g2259 16 125290937 125297609 PCT