Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g1796 ATGGAGATTGGAGAAACTGATAGAAACAAGGTTCAAGGAGAGGTTCCATGGATCCCCAACACCCCTTCGAAGCCTATTCTTCAAAGACCGCCGCCAATCTATGCTCCTCGAGAAGGAATCGAGATCGGGTCACATTCTAATGCGGTATCTGCATGTTGTGAATCCTCAACCAATGCAGAAATTGAGACCAGGCAACACCTTCGGCTACCACATGAGGCTGCAGTAACAAACATTGCCTGTGACAGTGACAAAACAAGTGCAAGATTGTCCTTTGACAACAATTCTGTGTCGAGTAATAACGGCTTTGCGGAGCTTTTGGCTCAGGCTAATGCTGCTTCAGCAACCTCCGTTGCAGCATATGCAGATTTTCTGAGGAATCATTTTGTTCCTAATTTAAATACAGAGATAAACCCCACCTGTGCTTTACTTGGCCAAGGTCATCTCTCTTATGGGCAACCCTTGTTCAATGCTACTCACAATTGTCAAGATCCTCGAGATAATGCTGTCAGAACAGGAAACACACAATATGCAGAGACACAACTGCATATGGAAAAGAAGGATCAAGGCAGAGAAGAGAATAAAGTTTCAGATGCAGAGCACAACAATAATGACAGCCCACAAAACAAAGAACTTTGTGATCCTTTAATAGAATTTGGTGCAGTTTCTACACAATGCCAAGAGAATCAGAGCCAGAATAAGGAAATAAATCCCCATGTTAATCTGAACAAGACACCACAACAAAAACCAAGAAGAAAGAAGCACCGCCCCAAGGTCATCATAGAAGGCAAACCGAGGAGAAACAGTAAAACAAAGACCCCAAAGTCTGATCAATCAAAAGAAAGCTCAACCAGCAAAAGGAAATATGTAAGAAAGAAGGGATCAAACACAACTTCTACTCCTCAAATAGAAGTGACGGGAGAATTGACTAATCCATTGATGCCAGAATCTGCCAAAAAGACATGCCGAAGATCCTTAAATTTTGACGTAGGAGATCAACAAAGGCAGAGAAATTCTAGATGCATAGAAGATACAAACATAAATTTAGGCAGAGAAACTGTTGCAGCAACAAATACTTTGACAAATGAAGGAAGACAAGCCCTCGGTACACCTCTTTCAGAAAGCAATTCTTGTTGGGCAATGCCACATGCTAACTCGATAGAGAATGGCAACAAAAGAAAGGGTCCACAGGATGAAAACAGAAACAGGGCACAAATTCTATCAAGCAGTGACACAAGAATTTCAACCACAAGTTTACAAGCAGTTGGTTCCAAGAGAAAGCATACAGGAACCATTAAGCATGAGGATACCAACAGCATTAATCTGATTGGGGTACAATATAATATGTTGCAGGCACACTACCAAGAGAGTTGGATTCAATTTCCAAATATTCAGAAGAAAAGGAGAAGTGAAAAGGGGAAAAATTCCAATACATCTTCAGCAAGTGCAACAAAAATTGTAGAAGTAGAAGTGTGCCCTCAAGATGCTAGATCAAGTCCTTACGCCTCAACTTCAAACTTTTGGCCCACTAGTTCTGAATATAATGCAGTAAAAGTCCCAGTCATGATTACAGCTACAGAAAGAGTTATTCATGATAAACCCCAGTCATTCAGATATAACTTATCTTCATGGCAGCCTATGCAAACCAAAAGAAGATCAAAACTCCCTACACGAAAGACATCTGTGAATGCTGAAAGAGAACAGACATGTATTGATGCTTTAGTTGCAGATATGGGAGCAACACTCAAAAAAAAGAAAAGAACTAAAAAGAGAAGCACTCTTGTCAGTTCAGCATATTCTTGCACAAGTGAAATGCAGCAGCATCAAAAAGTTATGCTGGAAAATTGCAGCTTGCCCTTGAACAACTTATTAGTTGTTGGCAGTGAAGAGACATGGAAAAATGTGCATAGTGCAGACGAATTAACAGAGCAATTTAGGCACCTAAACATAAATAGAGAAAGCAGAGAACTTCTATTACATGGGCAGAATACACTTGTCCCGTATAACCAGCAACATCAAAAGCACAAAGGCCCTGCCAATGGATATGGCACCATCATTCCCTATGAGGGCTCATTTGATCTCATTAAAAAACAACGCCCACGACCTAAAGTTGACCTTGATGAGGAGACTAATAGAGTGTGGAAGCTTCTTCTATTAGATATAAACAGTCCTGGAATTGATGGAATGGATGAAGACAAGGCTAAATGGTGGGAAGAAGAACGAAAAGTGTTCCGTGGAAGGGCCGACTCATTTATTGCACGGATGCATCTTGTACAAGGAGACAGACGATTTTCAAAATGGAAAGGATCAGTTGTGGACTCAGTGGTGGGAGTTTTCCTCACACAAAATGTCTCGGACCATCTTTCCAGTTCTGCATTCATGTCCCTTGCTGCTCGATTCCCCCTGAAGTCAAGCAACAAGTATCAAACATACAATGAGGGAAGCACAAGCTTGTTAGTCAGCAGACCACAACCAGAAGTGTACATTGTGGAACCAGAGGAGAGTTCACAGAAAGTATTGAATCCATGTGCTTATGACTTGAGTTCTATGACAATTGAGAGCACTGAACATTCTGAAGGAAAAGAAGTTGTTGACAGCAACGATTCCTGCAGAACAAATGGGAGCTTAACTAGCTCAACAGATGAATCAAACTTCAAACTGTCAGAATCAACTCAGAAACATATGAGGGACAACCATTGTCCATTGGAAAGTGGACCAATTGGTACCACCATAGGGGAAGCACAAGAAATTTCGTGTATTGGGAGTGTTAGCAAAGAGTTAAGTGACATGGTGTCATCCCAATGCTCTGTCATTACCTCTCAAATATGTGCAGAGTGTTCAGTTGAGCAAAGTCCAGAGAAGATAGGATCATGCTCAGAAAGCAACTCAGAAGTAGAAGAACTATCAAGTGCAGCCAAGTACAACATCTTTCATGATAGAACTTCTTTCAGTAAGCTTTTAGAAATGGCAAGTTTGACAACATTACATGAAGTAAACAGTCAAAAAAGCAAATCAACTGAGAACTCAAGAGATGCATCTGGTCAATCTATAGGCATAAAGCATGGCAACCAAACAGAAAAGTTGAATGTTACCCAAGATTTCCCAGAAGCCTCCATCATCACATGTAATGAATATTCTTTGAAAATGACCCCTAAAGGAGGAGTACTTGAAGCTGGCCCTTTTGAAATAGAAGACTTGTCAACTGATTTCAGAAAGAATAAAGAAGAAAATGACATGAAGGGGCCTGGTGTTCAAGCATCAGAGTCTGAAACCCAAGCTGCAATTGCCCATTCTCAATGTATGCTATCTCAGTTTCACAGTCAACAACAAAGTAATCACAAAGAGAAAAATGCTTTGCATGTTTTAGAAGAAACTCAAGATCCTATACAGAAACCAAGGGAATTAGATTGTGGTCATGAGAGCAATACCGTCAAAGAACACACTAAAATTGCCTCCACAAAATCAACAAAGAGTAGGGTGCACCTAAAGGATAAAAAAGATAATTTTGATTGGGATAGTTTAAGAAGACAAGCACAAGATAAGGCCGGGAAGAGGGAAAAGACAGAAAACACCATGGACTCTTTGGACTGGGATGCTGTTAGACGTGCAGACGTCAGAGAGATTGCTGATGCAATCAAGGAAAGGGGCATGAACAACATGCTTGCTGAACGTATTAAGAACTTCTTAAATCTCTTGGTTGATAAACATGGGGCCATTGACCTTGAGTGGCTAAGAGATGTTCCACCAGATCAAGCAAAAGAATACTTGCTCAACATAAGGGGATTGGGATTGAAGAGCGTGGAGTGTGTGCGACTTTTAACATTGCATAATCTTGCATTCCCGGTTGACACCAATGTTGGACGAATAGCAGTACGTTTGGGATGGGTGCCTCTCCAGCCACTACCTGAGTCACTACAATTGCATCTTCTAGAATTGTACCCTGTGCTGGAATCCATACAAAAATATCTTTGGCCCCGACTGTGCAAGCTAGACCAAAGAACACTGTATGAGCTGCACTATCAGCTGATTACATTTGGAAAGGTCTTCTGTACAAAATATAAACCAAACTGCAATGCATGCCCAATGAGAGGGGAATGTAGACACTTTGCAAGTGCTTTTGCAAGTGCAAGACTTGCCCTACCAGGACCAGAGCAAAAAGGTATAGTAATCGCAAACGGAAATAACGCAACAAATCAGAACCTGTCGGTAACCATCAATCAATTGCCCTTGCCTCTCCCTACAAATACAAGCCAAGCAGAAGAACTTCAAGAAATACAAGCAAGCAAACAACTTGAAGCAAGATCCGAAATCAATATTTGCCAACCAATTATTGAAGAGCCATCAACTCCAGAACCAGAATGCACCCAAGTGTTAGGAAATGATATAGAGGATGCCTTTTGTGAGGAAACATGTGAAATTCCAGCCATCAATGTAGACATGGAAGAACTCACTTTGAATGTACAAAATTATATGGAGGAAAACATGGATCTTCAAGAAGGTGAAATGTCAAAGGCCTTGGTCGCCCTTACTCCAGAAGCTGCCTGCATTCCAACGCCCAAGCTAAAGAATGTGAATCGATTGCGCACAGAGCATTGGGTTTATGAACTCCCAGATTCACATCGTCTATTAGAAGGGTGGGAGAAGCGAGAGCCTGATGATCCAGGAAAATACCTTCTAGCTATATGGACTCCAGGTGAGACAGCAAATTCTACACAGCCACCAGAAAAAAAATGCAGCTTTCAGGACTGTGGCCAGCTCTGTAATGAGAAAGAGTGCTTTCAATGCAACAGTTTCCGCGAAGCAAATTCACAGATAGTCCGAGGGACAATCCTGATACCATGTCGAACAGCTATGAGAGGGAGTTTTCCATTAAATGGCACCTATTTCCAAGTCAACGAGGTATTTGCTGATGATGAATCAAGTCTTAACCCAATTAGTGTTCCCCGAAGTTGGATCTGGAACCTCAGGAGGCGAACAGTATATTTCGGAACCTCCATCCCAACCATTTTTAGAGGTTTAACAACACAAGAAATTCAACGATGCTTTTGGAGAGGATATGTTTGCGTGCGGGGATTTGACAGGCAGAAAAGAGCACCGCGCCCTCTGAAGGCCAGGCTTCACTTCCCAGCTAGCAAGTTGGAGAAGAAAAAGCCATCAGCTCCAGCAAACACACCAGAAGAGCTTAATCTGAATCTGGAACCAAACCCGGAACCAAACCCGGAACAGCCAGAGCTGCTTGCCAACACTCCCAACCATTAA 5256 0.4182 MEIGETDRNKVQGEVPWIPNTPSKPILQRPPPIYAPREGIEIGSHSNAVSACCESSTNAEIETRQHLRLPHEAAVTNIACDSDKTSARLSFDNNSVSSNNGFAELLAQANAASATSVAAYADFLRNHFVPNLNTEINPTCALLGQGHLSYGQPLFNATHNCQDPRDNAVRTGNTQYAETQLHMEKKDQGREENKVSDAEHNNNDSPQNKELCDPLIEFGAVSTQCQENQSQNKEINPHVNLNKTPQQKPRRKKHRPKVIIEGKPRRNSKTKTPKSDQSKESSTSKRKYVRKKGSNTTSTPQIEVTGELTNPLMPESAKKTCRRSLNFDVGDQQRQRNSRCIEDTNINLGRETVAATNTLTNEGRQALGTPLSESNSCWAMPHANSIENGNKRKGPQDENRNRAQILSSSDTRISTTSLQAVGSKRKHTGTIKHEDTNSINLIGVQYNMLQAHYQESWIQFPNIQKKRRSEKGKNSNTSSASATKIVEVEVCPQDARSSPYASTSNFWPTSSEYNAVKVPVMITATERVIHDKPQSFRYNLSSWQPMQTKRRSKLPTRKTSVNAEREQTCIDALVADMGATLKKKKRTKKRSTLVSSAYSCTSEMQQHQKVMLENCSLPLNNLLVVGSEETWKNVHSADELTEQFRHLNINRESRELLLHGQNTLVPYNQQHQKHKGPANGYGTIIPYEGSFDLIKKQRPRPKVDLDEETNRVWKLLLLDINSPGIDGMDEDKAKWWEEERKVFRGRADSFIARMHLVQGDRRFSKWKGSVVDSVVGVFLTQNVSDHLSSSAFMSLAARFPLKSSNKYQTYNEGSTSLLVSRPQPEVYIVEPEESSQKVLNPCAYDLSSMTIESTEHSEGKEVVDSNDSCRTNGSLTSSTDESNFKLSESTQKHMRDNHCPLESGPIGTTIGEAQEISCIGSVSKELSDMVSSQCSVITSQICAECSVEQSPEKIGSCSESNSEVEELSSAAKYNIFHDRTSFSKLLEMASLTTLHEVNSQKSKSTENSRDASGQSIGIKHGNQTEKLNVTQDFPEASIITCNEYSLKMTPKGGVLEAGPFEIEDLSTDFRKNKEENDMKGPGVQASESETQAAIAHSQCMLSQFHSQQQSNHKEKNALHVLEETQDPIQKPRELDCGHESNTVKEHTKIASTKSTKSRVHLKDKKDNFDWDSLRRQAQDKAGKREKTENTMDSLDWDAVRRADVREIADAIKERGMNNMLAERIKNFLNLLVDKHGAIDLEWLRDVPPDQAKEYLLNIRGLGLKSVECVRLLTLHNLAFPVDTNVGRIAVRLGWVPLQPLPESLQLHLLELYPVLESIQKYLWPRLCKLDQRTLYELHYQLITFGKVFCTKYKPNCNACPMRGECRHFASAFASARLALPGPEQKGIVIANGNNATNQNLSVTINQLPLPLPTNTSQAEELQEIQASKQLEARSEINICQPIIEEPSTPEPECTQVLGNDIEDAFCEETCEIPAINVDMEELTLNVQNYMEENMDLQEGEMSKALVALTPEAACIPTPKLKNVNRLRTEHWVYELPDSHRLLEGWEKREPDDPGKYLLAIWTPGETANSTQPPEKKCSFQDCGQLCNEKECFQCNSFREANSQIVRGTILIPCRTAMRGSFPLNGTYFQVNEVFADDESSLNPISVPRSWIWNLRRRTVYFGTSIPTIFRGLTTQEIQRCFWRGYVCVRGFDRQKRAPRPLKARLHFPASKLEKKKPSAPANTPEELNLNLEPNPEPNPEQPELLANTPNH* 1752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 370 428 - -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 1131 1160 - -
Ahy16g1796 1751 Gene3D Hypothetical protein; domain 2 1185 1276 - -
Ahy16g1796 1751 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1150 1717 IPR044811 GO:0019104|GO:0035514|GO:0080111
Ahy16g1796 1751 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 1 349 IPR044811 GO:0019104|GO:0035514|GO:0080111
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 261 284 - -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 866 884 - -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 1706 1751 - -
Ahy16g1796 1751 Pfam RRM in Demeter 1607 1707 IPR028925 -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 245 260 - -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 224 317 - -
Ahy16g1796 1751 SUPERFAMILY DNA-glycosylase 745 1370 IPR011257 GO:0003824|GO:0006281
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 181 210 - -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 400 424 - -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 996 1029 - -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 856 884 - -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 224 244 - -
Ahy16g1796 1751 Pfam Permuted single zf-CXXC unit 1573 1604 IPR028924 -
Ahy16g1796 1751 PANTHER ROS1, PUTATIVE-RELATED 1 349 - -
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 181 206 - -
Ahy16g1796 1751 PANTHER TRANSCRIPTIONAL ACTIVATOR DEMETER 410 1107 IPR044811 GO:0019104|GO:0035514|GO:0080111
Ahy16g1796 1751 Coils Coil 1479 1499 - -
Ahy16g1796 1751 SMART endo3end 1173 1347 IPR003265 GO:0006284
Ahy16g1796 1751 CDD ENDO3c 1195 1313 IPR003265 GO:0006284
Ahy16g1796 1751 Gene3D - 1277 1365 IPR023170 -
Ahy16g1796 1751 SMART ccc3 1348 1368 IPR003651 GO:0051539
Ahy16g1796 1751 MobiDBLite consensus disorder prediction 1 29 - -
Ahy16g1796 1751 PANTHER ROS1, PUTATIVE-RELATED 1150 1717 - -
Ahy16g1796 1751 PANTHER ROS1, PUTATIVE-RELATED 410 1107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g1796 Ahy-Chr16 83789827 83799957 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy16g1796 - - adu:107493869 2182.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1796 16 83789827 83799957 Ahy6g1567 6 59838256 59848525 hybridization
Ahy16g1796 16 83789827 83799957 Ahy12g2980 12 119397044 119404997 PCT
Ahy16g1796 16 83789827 83799957 Ahy2g2565 2 101799119 101807072 PCT
Ahy12g2980 12 119397044 119404997 Ahy16g1796 16 83789827 83799957 PCT
Ahy2g2565 2 101799119 101807072 Ahy16g1796 16 83789827 83799957 PCT